Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 UBE2SP1-201ENST00000450587 669 ntBASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRAM1L1Q8N609 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAM1L1Q8N609 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
TRAM1L1Q8N609 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.52■□□□□ 0.71
TRAM1L1Q8N609 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.52■□□□□ 0.71
TRAM1L1Q8N609 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
TRAM1L1Q8N609 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 KRT16P5-201ENST00000455284 522 ntBASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAM1L1Q8N609 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 KRT18P16-201ENST00000510337 1294 ntBASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAM1L1Q8N609 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAM1L1Q8N609 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms