Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
LYSMD2Q8IV50 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.29■□□□□ 0.36
LYSMD2Q8IV50 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 MIR2861-201ENST00000636310 90 ntBASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 DPP3P2-201ENST00000416030 1696 ntBASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 AC009053.2-201ENST00000563701 2365 ntBASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LYSMD2Q8IV50 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 MKRN4P-201ENST00000444706 1521 ntBASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LYSMD2Q8IV50 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LYSMD2Q8IV50 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LYSMD2Q8IV50 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
LYSMD2Q8IV50 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
LYSMD2Q8IV50 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LYSMD2Q8IV50 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYSMD2Q8IV50 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms