Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 AC005229.4-201ENST00000610085 2198 ntBASIC30.19■■■□□ 2.42
ABCA9Q8IUA7 PHGDH-210ENST00000641115 1638 ntBASIC30.19■■■□□ 2.42
ABCA9Q8IUA7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA9Q8IUA7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA9Q8IUA7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA9Q8IUA7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 FXN-203ENST00000396366 922 ntTSL 2 BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 PVRIG2P-201ENST00000435460 978 ntBASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 AL049796.1-201ENST00000565336 1766 ntBASIC30.18■■■□□ 2.42
ABCA9Q8IUA7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
ABCA9Q8IUA7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 Z98882.1-201ENST00000622160 2253 ntBASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC30.16■■■□□ 2.42
ABCA9Q8IUA7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
ABCA9Q8IUA7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC30.15■■■□□ 2.42
ABCA9Q8IUA7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC30.15■■■□□ 2.42
ABCA9Q8IUA7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC30.15■■■□□ 2.42
ABCA9Q8IUA7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC30.15■■■□□ 2.42
ABCA9Q8IUA7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
ABCA9Q8IUA7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ABCA9Q8IUA7 SPDYE15P-201ENST00000424157 909 ntBASIC30.14■■■□□ 2.42
ABCA9Q8IUA7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
ABCA9Q8IUA7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
ABCA9Q8IUA7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
ABCA9Q8IUA7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
ABCA9Q8IUA7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ABCA9Q8IUA7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ABCA9Q8IUA7 AC121338.2-201ENST00000622535 1744 ntBASIC30.14■■■□□ 2.42
ABCA9Q8IUA7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC30.14■■■□□ 2.42
ABCA9Q8IUA7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 STARP1-201ENST00000397973 869 ntBASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
ABCA9Q8IUA7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ABCA9Q8IUA7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
ABCA9Q8IUA7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms