Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 ITIH3-210ENST00000495622 920 ntTSL 531.53■■■□□ 2.643e-11■□□□□ 9.2
PABPN1Q86U42 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC34.61■■■■□ 3.132e-7■□□□□ 9.2
PABPN1Q86U42 IL17RE-204ENST00000434065 2541 ntTSL 233.99■■■■□ 3.032e-7■□□□□ 9.2
PABPN1Q86U42 IL17RE-202ENST00000383815 2808 ntTSL 231.32■■■□□ 2.62e-7■□□□□ 9.2
PABPN1Q86U42 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC30.55■■■□□ 2.482e-7■□□□□ 9.2
PABPN1Q86U42 SEMA3B-205ENST00000434030 1011 ntTSL 345■■■■■ 4.793e-11■□□□□ 9.2
PABPN1Q86U42 SEMA3B-206ENST00000439487 594 ntTSL 338.09■■■■□ 3.693e-11■□□□□ 9.2
PABPN1Q86U42 GAA-205ENST00000572080 723 ntTSL 333.55■■■□□ 2.963e-11■□□□□ 9.2
PABPN1Q86U42 TRAP1-216ENST00000576335 645 ntTSL 520.99■□□□□ 0.957e-13■□□□□ 9.2
PABPN1Q86U42 DAZAP1-210ENST00000592453 1021 ntTSL 526.47■■□□□ 1.831e-7■□□□□ 9.2
PABPN1Q86U42 MTND2P28-201ENST00000457540 1044 ntBASIC15.72■□□□□ 0.116e-17■□□□□ 9.2
PABPN1Q86U42 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC23.55■■□□□ 1.363e-8■□□□□ 9.2
PABPN1Q86U42 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC26.6■■□□□ 1.858e-7■□□□□ 9.2
PABPN1Q86U42 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.038e-7■□□□□ 9.2
PABPN1Q86U42 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC52.28■■■■■ 5.961e-12■□□□□ 9.2
PABPN1Q86U42 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC49.31■■■■■ 5.481e-12■□□□□ 9.2
PABPN1Q86U42 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC49.06■■■■■ 5.441e-12■□□□□ 9.2
PABPN1Q86U42 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC42.16■■■■■ 4.341e-12■□□□□ 9.2
PABPN1Q86U42 GPS1-209ENST00000578642 579 ntTSL 439.11■■■■□ 3.851e-7■□□□□ 9.2
PABPN1Q86U42 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.731e-12■□□□□ 9.2
PABPN1Q86U42 KRT8-208ENST00000547031 883 ntTSL 234.2■■■■□ 3.071e-7■□□□□ 9.2
PABPN1Q86U42 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC33.5■■■□□ 2.951e-12■□□□□ 9.2
PABPN1Q86U42 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.671e-12■□□□□ 9.2
PABPN1Q86U42 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.411e-7■□□□□ 9.2
PABPN1Q86U42 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC30.09■■■□□ 2.411e-7■□□□□ 9.2
PABPN1Q86U42 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.351e-7■□□□□ 9.2
PABPN1Q86U42 KRT8-213ENST00000550170 2202 ntTSL 528.28■■■□□ 2.121e-7■□□□□ 9.2
PABPN1Q86U42 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.961e-7■□□□□ 9.2
PABPN1Q86U42 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.431e-7■□□□□ 9.2
PABPN1Q86U42 KRT8-203ENST00000546583 2862 ntTSL 523.75■■□□□ 1.391e-7■□□□□ 9.2
PABPN1Q86U42 ACSS2-209ENST00000475459 558 ntTSL 426.24■■□□□ 1.795e-6■□□□□ 9.2
PABPN1Q86U42 ACSS2-206ENST00000468550 547 ntTSL 521.95■■□□□ 1.15e-6■□□□□ 9.2
PABPN1Q86U42 PLCG1-205ENST00000465571 543 ntTSL 223.1■■□□□ 1.291e-12■□□□□ 9.1
PABPN1Q86U42 TMEM94-203ENST00000577194 478 ntTSL 337.94■■■■□ 3.662e-9■□□□□ 9.1
PABPN1Q86U42 GSDMB-211ENST00000519429 616 ntTSL 512.75□□□□□ -0.373e-14■□□□□ 9.1
PABPN1Q86U42 CDC37-207ENST00000589755 793 ntTSL 239.47■■■■□ 3.915e-7■□□□□ 9.1
PABPN1Q86U42 CDC37-210ENST00000593124 1389 ntTSL 538.56■■■■□ 3.765e-7■□□□□ 9.1
PABPN1Q86U42 CDC37-209ENST00000591248 1377 ntTSL 530.66■■■□□ 2.55e-7■□□□□ 9.1
PABPN1Q86U42 CDC37-206ENST00000589629 728 ntTSL 328.15■■■□□ 2.15e-7■□□□□ 9.1
PABPN1Q86U42 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.342e-15■□□□□ 9.1
PABPN1Q86U42 CSNK1G2-207ENST00000590106 1006 ntTSL 529.42■■■□□ 2.33e-8■□□□□ 9.1
PABPN1Q86U42 MYO19-218ENST00000617189 1990 ntTSL 228.21■■■□□ 2.113e-8■□□□□ 9.1
PABPN1Q86U42 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC24.98■■□□□ 1.593e-8■□□□□ 9.1
PABPN1Q86U42 FDPS-216ENST00000491013 912 ntTSL 529.35■■■□□ 2.292e-8■□□□□ 9.1
PABPN1Q86U42 DCTN1-225ENST00000497666 479 ntTSL 331.85■■■□□ 2.695e-6■□□□□ 9.1
PABPN1Q86U42 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.965e-6■□□□□ 9.1
PABPN1Q86U42 DCTN1-210ENST00000434055 4229 ntTSL 220.52■□□□□ 0.885e-6■□□□□ 9.1
PABPN1Q86U42 DCTN1-206ENST00000409868 4202 ntTSL 5 BASIC19.36■□□□□ 0.695e-6■□□□□ 9.1
PABPN1Q86U42 DCTN1-227ENST00000633691 4160 ntTSL 5 BASIC18.07■□□□□ 0.485e-6■□□□□ 9.1
PABPN1Q86U42 DCTN1-218ENST00000466110 5414 ntTSL 218.05■□□□□ 0.485e-6■□□□□ 9.1
PABPN1Q86U42 DCTN1-201ENST00000361874 4500 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.375e-6■□□□□ 9.1
PABPN1Q86U42 DCTN1-202ENST00000394003 4479 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.255e-6■□□□□ 9.1
PABPN1Q86U42 DCTN1-204ENST00000409438 4145 ntTSL 1 (best) BASIC15.89■□□□□ 0.135e-6■□□□□ 9.1
PABPN1Q86U42 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.015e-6■□□□□ 9.1
PABPN1Q86U42 DCTN1-226ENST00000628224 4485 ntTSL 5 BASIC14.4□□□□□ -0.15e-6■□□□□ 9.1
PABPN1Q86U42 ENGASE-210ENST00000585160 284 ntTSL 347.08■■■■■ 5.137e-8■□□□□ 9.1
PABPN1Q86U42 SYMPK-212ENST00000598896 1899 ntTSL 1 (best)42.22■■■■■ 4.357e-8■□□□□ 9.1
PABPN1Q86U42 ENGASE-206ENST00000579809 1428 ntTSL 1 (best)34.64■■■■□ 3.147e-8■□□□□ 9.1
PABPN1Q86U42 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.777e-8■□□□□ 9.1
PABPN1Q86U42 HDAC5-206ENST00000587776 917 ntTSL 331.95■■■□□ 2.717e-8■□□□□ 9.1
PABPN1Q86U42 HDAC5-207ENST00000588261 846 ntTSL 330.68■■■□□ 2.57e-8■□□□□ 9.1
PABPN1Q86U42 HDAC5-211ENST00000592385 2601 ntTSL 524.06■■□□□ 1.447e-8■□□□□ 9.1
PABPN1Q86U42 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.117e-8■□□□□ 9.1
PABPN1Q86U42 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.387e-8■□□□□ 9.1
PABPN1Q86U42 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC37.09■■■■□ 3.536e-6■□□□□ 9.1
PABPN1Q86U42 TAF15-210ENST00000604694 891 ntTSL 535.28■■■■□ 3.242e-8■□□□□ 9.1
PABPN1Q86U42 GPAA1-218ENST00000534072 1090 ntTSL 234.81■■■■□ 3.166e-6■□□□□ 9.1
PABPN1Q86U42 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.166e-6■□□□□ 9.1
PABPN1Q86U42 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.822e-8■□□□□ 9.1
PABPN1Q86U42 GPAA1-212ENST00000529638 1570 ntTSL 532.48■■■□□ 2.796e-6■□□□□ 9.1
PABPN1Q86U42 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.612e-8■□□□□ 9.1
PABPN1Q86U42 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.122e-8■□□□□ 9.1
PABPN1Q86U42 GPAA1-215ENST00000530796 936 ntTSL 326.52■■□□□ 1.846e-6■□□□□ 9.1
PABPN1Q86U42 CHKB-211ENST00000489453 722 ntTSL 221.89■■□□□ 1.092e-6■□□□□ 9.1
PABPN1Q86U42 SRSF11-208ENST00000463859 1035 ntTSL 516.99■□□□□ 0.314e-15■□□□□ 9.1
PABPN1Q86U42 SRSF11-216ENST00000489188 784 ntTSL 29.93□□□□□ -0.824e-15■□□□□ 9.1
PABPN1Q86U42 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.723e-36■□□□□ 9.1
PABPN1Q86U42 ASGR1-206ENST00000573596 2083 ntTSL 532.35■■■□□ 2.771e-7■□□□□ 9.1
PABPN1Q86U42 ASGR1-205ENST00000573083 855 ntTSL 319.71■□□□□ 0.751e-7■□□□□ 9.1
PABPN1Q86U42 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.657e-17■□□□□ 9
PABPN1Q86U42 NDRG1-216ENST00000521026 2145 ntTSL 222.71■■□□□ 1.237e-17■□□□□ 9
PABPN1Q86U42 NDRG1-217ENST00000521414 2349 ntTSL 222.41■■□□□ 1.187e-17■□□□□ 9
PABPN1Q86U42 NDRG1-204ENST00000517599 2918 ntTSL 219.43■□□□□ 0.77e-17■□□□□ 9
PABPN1Q86U42 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.537e-17■□□□□ 9
PABPN1Q86U42 NDRG1-218ENST00000521438 2810 ntTSL 217.94■□□□□ 0.467e-17■□□□□ 9
PABPN1Q86U42 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC15.57■□□□□ 0.087e-17■□□□□ 9
PABPN1Q86U42 NDRG1-212ENST00000519278 3983 ntTSL 214.99□□□□□ -0.017e-17■□□□□ 9
PABPN1Q86U42 TMC6-215ENST00000590494 702 ntTSL 225.35■■□□□ 1.651e-13■□□□□ 9
PABPN1Q86U42 HSPA5-201ENST00000324460 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.243e-26■□□□□ 9
PABPN1Q86U42 TF-204ENST00000461695 990 ntTSL 320.49■□□□□ 0.873e-18■□□□□ 9
PABPN1Q86U42 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.863e-18■□□□□ 9
PABPN1Q86U42 TF-207ENST00000467842 4602 ntTSL 1 (best)8.07□□□□□ -1.123e-18■□□□□ 9
PABPN1Q86U42 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC28.92■■■□□ 2.221e-7■□□□□ 9
PABPN1Q86U42 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.091e-7■□□□□ 9
PABPN1Q86U42 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC27.12■■□□□ 1.931e-7■□□□□ 9
PABPN1Q86U42 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC23.52■■□□□ 1.363e-8■□□□□ 9
PABPN1Q86U42 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC23.52■■□□□ 1.363e-8■□□□□ 9
PABPN1Q86U42 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC22.41■■□□□ 1.183e-8■□□□□ 9
PABPN1Q86U42 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.843e-8■□□□□ 9
PABPN1Q86U42 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC19.03■□□□□ 0.643e-8■□□□□ 9
Retrieved 100 of 8,254 protein–RNA pairs in 57.5 ms