Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 AL691432.3-201ENST00000621860 400 ntBASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 AL671277.2-201ENST00000458060 996 ntBASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VPS13BQ7Z7G8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 AC007375.3-201ENST00000600936 2314 ntBASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 KRT18P38-201ENST00000449496 1282 ntBASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 AL023803.3-201ENST00000615559 522 ntBASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
VPS13BQ7Z7G8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 AP002982.1-201ENST00000492365 877 ntBASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 IER3-202ENST00000376377 1350 ntBASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 KSR1P1-201ENST00000446298 240 ntBASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 AC097488.1-201ENST00000507834 756 ntBASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 HYMAI.1-201ENST00000620949 238 ntBASIC12.21□□□□□ -0.46
VPS13BQ7Z7G8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 KRT8P20-201ENST00000423953 1409 ntBASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms