Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 AC137761.2-201ENST00000561729 223 ntBASIC17.13■□□□□ 0.33
C11orf88Q6PI97 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 AC145350.3-201ENST00000569033 163 ntBASIC17.13■□□□□ 0.33
C11orf88Q6PI97 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 CROCCP1-201ENST00000426910 5675 ntBASIC17.13■□□□□ 0.33
C11orf88Q6PI97 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 AC009237.3-201ENST00000393279 1427 ntBASIC17.13■□□□□ 0.33
C11orf88Q6PI97 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 AC006015.1-201ENST00000429970 570 ntBASIC17.12■□□□□ 0.33
C11orf88Q6PI97 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
C11orf88Q6PI97 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 NEFHP1-201ENST00000412845 2629 ntBASIC17.11■□□□□ 0.33
C11orf88Q6PI97 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf88Q6PI97 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf88Q6PI97 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms