Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 AP000550.4-202ENST00000639755 178 ntBASIC21.3■■□□□ 1
CNKSR3Q6P9H4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CNKSR3Q6P9H4 AC092338.2-201ENST00000568827 1415 ntBASIC21.29■■□□□ 1
CNKSR3Q6P9H4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 AC141257.4-201ENST00000634557 245 ntBASIC21.29■■□□□ 1
CNKSR3Q6P9H4 AC136944.6-201ENST00000634818 245 ntBASIC21.29■■□□□ 1
CNKSR3Q6P9H4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.29■■□□□ 1
CNKSR3Q6P9H4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.28■■□□□ 1
CNKSR3Q6P9H4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CNKSR3Q6P9H4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CNKSR3Q6P9H4 TSPY17P-201ENST00000450329 467 ntBASIC21.27■■□□□ 1
CNKSR3Q6P9H4 KRT18P56-201ENST00000507275 550 ntBASIC21.27■■□□□ 1
CNKSR3Q6P9H4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.27■■□□□ 1
CNKSR3Q6P9H4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.27■■□□□ 1
CNKSR3Q6P9H4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.27■■□□□ 1
CNKSR3Q6P9H4 AL023803.3-201ENST00000615559 522 ntBASIC21.27■■□□□ 1
CNKSR3Q6P9H4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNKSR3Q6P9H4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 AC092720.2-201ENST00000602388 1665 ntBASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 AC006128.1-201ENST00000624704 1661 ntBASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 AC009947.2-201ENST00000444014 672 ntBASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 Z85996.1-201ENST00000494644 937 ntBASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.26■□□□□ 0.99
CNKSR3Q6P9H4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms