Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.93■□□□□ 0.46
NIPAL3Q6P499 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPAL3Q6P499 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NIPAL3Q6P499 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPAL3Q6P499 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NIPAL3Q6P499 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NIPAL3Q6P499 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.92■□□□□ 0.46
NIPAL3Q6P499 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.92■□□□□ 0.46
NIPAL3Q6P499 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NIPAL3Q6P499 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 AC098934.4-201ENST00000564127 592 ntBASIC17.91■□□□□ 0.46
NIPAL3Q6P499 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 TNXA-203ENST00000507684 2038 ntBASIC17.91■□□□□ 0.46
NIPAL3Q6P499 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NIPAL3Q6P499 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.9■□□□□ 0.46
NIPAL3Q6P499 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 AC091874.3-201ENST00000512672 1195 ntBASIC17.9■□□□□ 0.46
NIPAL3Q6P499 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NIPAL3Q6P499 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NIPAL3Q6P499 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.89■□□□□ 0.46
NIPAL3Q6P499 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 AC097658.1-201ENST00000475555 843 ntBASIC17.89■□□□□ 0.45
NIPAL3Q6P499 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 AC133041.1-202ENST00000642053 222 ntBASIC17.89■□□□□ 0.45
NIPAL3Q6P499 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms