Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LPCAT4Q643R3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 AL354751.1-201ENST00000412768 1863 ntBASIC18.56■□□□□ 0.56
LPCAT4Q643R3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 BICD1-207ENST00000551848 1962 ntBASIC18.56■□□□□ 0.56
LPCAT4Q643R3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 MIR3621-201ENST00000580529 85 ntBASIC18.56■□□□□ 0.56
LPCAT4Q643R3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.56■□□□□ 0.56
LPCAT4Q643R3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LPCAT4Q643R3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 AC245052.3-201ENST00000450182 901 ntBASIC18.54■□□□□ 0.56
LPCAT4Q643R3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 DUX4L19-201ENST00000557448 1267 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms