Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 COX20P2-201ENST00000452636 358 ntBASIC10.6□□□□□ -0.71
RNF213Q63HN8 AL773604.1-201ENST00000617417 272 ntBASIC10.6□□□□□ -0.71
RNF213Q63HN8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 REXO1L6P-202ENST00000619970 1078 ntBASIC10.6□□□□□ -0.71
RNF213Q63HN8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 EED-207ENST00000528180 1745 ntTSL 5 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 AC010327.4-202ENST00000591484 748 ntBASIC10.59□□□□□ -0.71
RNF213Q63HN8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 AC148477.8-201ENST00000624298 468 ntBASIC10.59□□□□□ -0.71
RNF213Q63HN8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 AL356652.1-201ENST00000615962 565 ntBASIC10.59□□□□□ -0.71
RNF213Q63HN8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC10.59□□□□□ -0.71
RNF213Q63HN8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RNF213Q63HN8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 AL121772.3-201ENST00000610840 674 ntBASIC10.58□□□□□ -0.72
RNF213Q63HN8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 UPF3AP3-201ENST00000420996 769 ntBASIC10.58□□□□□ -0.72
RNF213Q63HN8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 MOK-208ENST00000519058 917 ntTSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC10.58□□□□□ -0.72
RNF213Q63HN8 TOB2P1-201ENST00000469761 992 ntBASIC10.58□□□□□ -0.72
RNF213Q63HN8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms