Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF20Q5VTR2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 PNMA6B-201ENST00000538162 1200 ntBASIC23.54■■□□□ 1.36
RNF20Q5VTR2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF20Q5VTR2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF20Q5VTR2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 AIRN-201ENST00000601203 4374 ntBASIC23.52■■□□□ 1.36
RNF20Q5VTR2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.52■■□□□ 1.36
RNF20Q5VTR2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
RNF20Q5VTR2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RNF20Q5VTR2 HLA-L-209ENST00000420110 1011 ntBASIC23.51■■□□□ 1.35
RNF20Q5VTR2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF20Q5VTR2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.51■■□□□ 1.35
RNF20Q5VTR2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF20Q5VTR2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.51■■□□□ 1.35
RNF20Q5VTR2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 TFP1-202ENST00000475455 1573 ntBASIC23.5■■□□□ 1.35
RNF20Q5VTR2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 AL355802.2-201ENST00000402069 882 ntBASIC23.5■■□□□ 1.35
RNF20Q5VTR2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.5■■□□□ 1.35
RNF20Q5VTR2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 RPS2P52-201ENST00000469610 820 ntBASIC23.5■■□□□ 1.35
RNF20Q5VTR2 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.5■■□□□ 1.35
RNF20Q5VTR2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.5■■□□□ 1.35
RNF20Q5VTR2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms