Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LGSNQ5TDP6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 AL032819.2-201ENST00000624543 2162 ntBASIC19.84■□□□□ 0.77
LGSNQ5TDP6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 MCRIP2P1-201ENST00000394346 511 ntBASIC19.84■□□□□ 0.77
LGSNQ5TDP6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LGSNQ5TDP6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.83■□□□□ 0.77
LGSNQ5TDP6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LGSNQ5TDP6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LGSNQ5TDP6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LGSNQ5TDP6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LGSNQ5TDP6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LGSNQ5TDP6 AC007322.4-201ENST00000509611 723 ntBASIC19.83■□□□□ 0.77
LGSNQ5TDP6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.83■□□□□ 0.77
LGSNQ5TDP6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.83■□□□□ 0.77
LGSNQ5TDP6 AC013268.1-206ENST00000638368 961 ntBASIC19.83■□□□□ 0.77
LGSNQ5TDP6 AC112229.1-201ENST00000639295 961 ntBASIC19.83■□□□□ 0.77
LGSNQ5TDP6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LGSNQ5TDP6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LGSNQ5TDP6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LGSNQ5TDP6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms