Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 ABHD17AP1-201ENST00000358206 933 ntBASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 FAM201B-201ENST00000458407 597 ntBASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCSMST1Q4G0I0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCSMST1Q4G0I0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCSMST1Q4G0I0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCSMST1Q4G0I0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 AL023875.1-201ENST00000640777 796 ntBASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCSMST1Q4G0I0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
CCSMST1Q4G0I0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCSMST1Q4G0I0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.13■□□□□ 0.65
CCSMST1Q4G0I0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCSMST1Q4G0I0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.13■□□□□ 0.65
CCSMST1Q4G0I0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCSMST1Q4G0I0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCSMST1Q4G0I0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
CCSMST1Q4G0I0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCSMST1Q4G0I0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms