Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
USH1GQ495M9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
USH1GQ495M9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
USH1GQ495M9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
USH1GQ495M9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.67■■□□□ 1.22
USH1GQ495M9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.66■■□□□ 1.22
USH1GQ495M9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.66■■□□□ 1.22
USH1GQ495M9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 YBX1P10-201ENST00000444752 975 ntBASIC22.66■■□□□ 1.22
USH1GQ495M9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.66■■□□□ 1.22
USH1GQ495M9 AL355075.4-201ENST00000554988 638 ntBASIC22.66■■□□□ 1.22
USH1GQ495M9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.66■■□□□ 1.22
USH1GQ495M9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
USH1GQ495M9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 AC073195.1-201ENST00000607241 877 ntBASIC22.66■■□□□ 1.22
USH1GQ495M9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
USH1GQ495M9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
USH1GQ495M9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.66■■□□□ 1.22
USH1GQ495M9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
USH1GQ495M9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.66■■□□□ 1.22
USH1GQ495M9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.65■■□□□ 1.22
USH1GQ495M9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USH1GQ495M9 AL691432.2-201ENST00000607222 2038 ntBASIC22.65■■□□□ 1.22
USH1GQ495M9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
USH1GQ495M9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USH1GQ495M9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.65■■□□□ 1.22
USH1GQ495M9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.65■■□□□ 1.22
USH1GQ495M9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.65■■□□□ 1.22
USH1GQ495M9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USH1GQ495M9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.65■■□□□ 1.22
USH1GQ495M9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.65■■□□□ 1.22
USH1GQ495M9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
USH1GQ495M9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.65■■□□□ 1.22
USH1GQ495M9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USH1GQ495M9 AL162377.1-201ENST00000618844 1793 ntBASIC22.65■■□□□ 1.22
USH1GQ495M9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
USH1GQ495M9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
USH1GQ495M9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
USH1GQ495M9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.64■■□□□ 1.22
USH1GQ495M9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
USH1GQ495M9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
USH1GQ495M9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
USH1GQ495M9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
USH1GQ495M9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
USH1GQ495M9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USH1GQ495M9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.64■■□□□ 1.21
USH1GQ495M9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.64■■□□□ 1.21
USH1GQ495M9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.64■■□□□ 1.21
USH1GQ495M9 AL355355.2-201ENST00000442321 338 ntBASIC22.64■■□□□ 1.21
USH1GQ495M9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.64■■□□□ 1.21
USH1GQ495M9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.64■■□□□ 1.21
USH1GQ495M9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.64■■□□□ 1.21
USH1GQ495M9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.64■■□□□ 1.21
USH1GQ495M9 AP003071.4-201ENST00000562276 1284 ntBASIC22.64■■□□□ 1.21
USH1GQ495M9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
USH1GQ495M9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
USH1GQ495M9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
USH1GQ495M9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
USH1GQ495M9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.64■■□□□ 1.21
USH1GQ495M9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
USH1GQ495M9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.63■■□□□ 1.21
USH1GQ495M9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.63■■□□□ 1.21
USH1GQ495M9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USH1GQ495M9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USH1GQ495M9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.63■■□□□ 1.21
USH1GQ495M9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USH1GQ495M9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
USH1GQ495M9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
USH1GQ495M9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
USH1GQ495M9 BX088651.1-201ENST00000540551 451 ntBASIC22.63■■□□□ 1.21
USH1GQ495M9 AC073912.3-201ENST00000624414 853 ntBASIC22.63■■□□□ 1.21
USH1GQ495M9 CR392000.1-201ENST00000624770 1228 ntBASIC22.63■■□□□ 1.21
USH1GQ495M9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
USH1GQ495M9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
USH1GQ495M9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.63■■□□□ 1.21
USH1GQ495M9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.63■■□□□ 1.21
USH1GQ495M9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.63■■□□□ 1.21
USH1GQ495M9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
USH1GQ495M9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
USH1GQ495M9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.62■■□□□ 1.21
USH1GQ495M9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
USH1GQ495M9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.62■■□□□ 1.21
USH1GQ495M9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
USH1GQ495M9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
USH1GQ495M9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
USH1GQ495M9 NIFKP9-201ENST00000419265 221 ntBASIC22.62■■□□□ 1.21
USH1GQ495M9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
USH1GQ495M9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.62■■□□□ 1.21
USH1GQ495M9 C1QL1P1-201ENST00000568105 661 ntBASIC22.62■■□□□ 1.21
USH1GQ495M9 AL353708.3-201ENST00000610272 989 ntBASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms