Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYPL1Q16563 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SYPL1Q16563 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYPL1Q16563 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SYPL1Q16563 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SYPL1Q16563 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.33■□□□□ 0.52
SYPL1Q16563 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SYPL1Q16563 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.33■□□□□ 0.52
SYPL1Q16563 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.33■□□□□ 0.52
SYPL1Q16563 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SYPL1Q16563 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SYPL1Q16563 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SYPL1Q16563 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.33■□□□□ 0.52
SYPL1Q16563 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SYPL1Q16563 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SYPL1Q16563 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SYPL1Q16563 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.33■□□□□ 0.52
SYPL1Q16563 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYPL1Q16563 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYPL1Q16563 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYPL1Q16563 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYPL1Q16563 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
SYPL1Q16563 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.33■□□□□ 0.52
SYPL1Q16563 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SYPL1Q16563 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SYPL1Q16563 AC018553.1-201ENST00000616682 1458 ntBASIC18.33■□□□□ 0.52
SYPL1Q16563 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYPL1Q16563 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYPL1Q16563 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYPL1Q16563 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYPL1Q16563 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.32■□□□□ 0.52
SYPL1Q16563 DUSP5P2-201ENST00000426873 1033 ntBASIC18.32■□□□□ 0.52
SYPL1Q16563 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.32■□□□□ 0.52
SYPL1Q16563 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.32■□□□□ 0.52
SYPL1Q16563 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.32■□□□□ 0.52
SYPL1Q16563 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.32■□□□□ 0.52
SYPL1Q16563 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.32■□□□□ 0.52
SYPL1Q16563 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYPL1Q16563 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.32■□□□□ 0.52
SYPL1Q16563 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SYPL1Q16563 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SYPL1Q16563 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.32■□□□□ 0.52
SYPL1Q16563 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.32■□□□□ 0.52
SYPL1Q16563 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SYPL1Q16563 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYPL1Q16563 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYPL1Q16563 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SYPL1Q16563 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYPL1Q16563 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYPL1Q16563 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.31■□□□□ 0.52
SYPL1Q16563 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SYPL1Q16563 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SYPL1Q16563 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SYPL1Q16563 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.31■□□□□ 0.52
SYPL1Q16563 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.31■□□□□ 0.52
SYPL1Q16563 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.31■□□□□ 0.52
SYPL1Q16563 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.31■□□□□ 0.52
SYPL1Q16563 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.31■□□□□ 0.52
SYPL1Q16563 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SYPL1Q16563 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.31■□□□□ 0.52
SYPL1Q16563 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SYPL1Q16563 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SYPL1Q16563 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYPL1Q16563 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.3■□□□□ 0.52
SYPL1Q16563 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SYPL1Q16563 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SYPL1Q16563 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.3■□□□□ 0.52
SYPL1Q16563 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.3■□□□□ 0.52
SYPL1Q16563 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.3■□□□□ 0.52
SYPL1Q16563 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.3■□□□□ 0.52
SYPL1Q16563 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.3■□□□□ 0.52
SYPL1Q16563 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.3■□□□□ 0.52
SYPL1Q16563 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SYPL1Q16563 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.3■□□□□ 0.52
SYPL1Q16563 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.3■□□□□ 0.52
SYPL1Q16563 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYPL1Q16563 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.3■□□□□ 0.52
SYPL1Q16563 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms