Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM258P61165 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM258P61165 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM258P61165 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TMEM258P61165 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM258P61165 AL136379.1-201ENST00000623471 2642 ntBASIC11.84□□□□□ -0.51
TMEM258P61165 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM258P61165 TCF3P1-201ENST00000423021 1937 ntBASIC11.84□□□□□ -0.51
TMEM258P61165 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM258P61165 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM258P61165 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM258P61165 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TMEM258P61165 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC11.83□□□□□ -0.51
TMEM258P61165 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.51
TMEM258P61165 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC11.83□□□□□ -0.51
TMEM258P61165 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TMEM258P61165 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC11.83□□□□□ -0.52
TMEM258P61165 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.83□□□□□ -0.52
TMEM258P61165 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TMEM258P61165 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC11.83□□□□□ -0.52
TMEM258P61165 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC11.83□□□□□ -0.52
TMEM258P61165 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 AC093484.2-201ENST00000580996 2166 ntBASIC11.83□□□□□ -0.52
TMEM258P61165 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC11.83□□□□□ -0.52
TMEM258P61165 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TMEM258P61165 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TMEM258P61165 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TMEM258P61165 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.83□□□□□ -0.52
TMEM258P61165 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TMEM258P61165 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TMEM258P61165 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
TMEM258P61165 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.83□□□□□ -0.52
TMEM258P61165 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TMEM258P61165 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM258P61165 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.82□□□□□ -0.52
TMEM258P61165 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC11.82□□□□□ -0.52
TMEM258P61165 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.82□□□□□ -0.52
TMEM258P61165 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 EML3-212ENST00000494176 2901 ntTSL 2 BASIC11.82□□□□□ -0.52
TMEM258P61165 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
TMEM258P61165 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 BICD1-207ENST00000551848 1962 ntBASIC11.82□□□□□ -0.52
TMEM258P61165 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.82□□□□□ -0.52
TMEM258P61165 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.82□□□□□ -0.52
TMEM258P61165 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC11.82□□□□□ -0.52
TMEM258P61165 AC090164.3-201ENST00000610780 2143 ntBASIC11.82□□□□□ -0.52
TMEM258P61165 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 TCAF2P1-201ENST00000291129 2421 ntBASIC11.82□□□□□ -0.52
TMEM258P61165 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.82□□□□□ -0.52
TMEM258P61165 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TMEM258P61165 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC11.82□□□□□ -0.52
TMEM258P61165 AL118508.1-201ENST00000613502 2345 ntBASIC11.82□□□□□ -0.52
TMEM258P61165 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
TMEM258P61165 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TMEM258P61165 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC11.82□□□□□ -0.52
TMEM258P61165 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.82□□□□□ -0.52
TMEM258P61165 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TMEM258P61165 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
TMEM258P61165 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
TMEM258P61165 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
TMEM258P61165 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TMEM258P61165 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TMEM258P61165 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TMEM258P61165 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TMEM258P61165 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TMEM258P61165 AC135776.1-201ENST00000319817 2481 ntBASIC11.81□□□□□ -0.52
TMEM258P61165 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.81□□□□□ -0.52
TMEM258P61165 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC11.81□□□□□ -0.52
TMEM258P61165 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TMEM258P61165 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms