Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.21■□□□□ 0.51
PER3P56645 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 CD177P1-201ENST00000606252 935 ntBASIC18.21■□□□□ 0.51
PER3P56645 AC120498.8-201ENST00000614275 531 ntBASIC18.21■□□□□ 0.51
PER3P56645 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.21■□□□□ 0.51
PER3P56645 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PER3P56645 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PER3P56645 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PER3P56645 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.2■□□□□ 0.5
PER3P56645 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PER3P56645 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.2■□□□□ 0.5
PER3P56645 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PER3P56645 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PER3P56645 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PER3P56645 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PER3P56645 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PER3P56645 TMPOP1-202ENST00000424642 1267 ntBASIC18.2■□□□□ 0.5
PER3P56645 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.2■□□□□ 0.5
PER3P56645 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PER3P56645 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.2■□□□□ 0.5
PER3P56645 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PER3P56645 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.2■□□□□ 0.5
PER3P56645 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PER3P56645 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PER3P56645 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PER3P56645 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PER3P56645 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.2■□□□□ 0.5
PER3P56645 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.19■□□□□ 0.5
PER3P56645 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.19■□□□□ 0.5
PER3P56645 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PER3P56645 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PER3P56645 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.19■□□□□ 0.5
PER3P56645 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.19■□□□□ 0.5
PER3P56645 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PER3P56645 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 RCN1P1-201ENST00000400413 996 ntBASIC18.19■□□□□ 0.5
PER3P56645 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.19■□□□□ 0.5
PER3P56645 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PER3P56645 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.19■□□□□ 0.5
PER3P56645 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.19■□□□□ 0.5
PER3P56645 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.19■□□□□ 0.5
PER3P56645 AC087633.2-202ENST00000565166 1439 ntBASIC18.19■□□□□ 0.5
PER3P56645 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.19■□□□□ 0.5
PER3P56645 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.19■□□□□ 0.5
PER3P56645 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.19■□□□□ 0.5
PER3P56645 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.19■□□□□ 0.5
PER3P56645 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.19■□□□□ 0.5
PER3P56645 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PER3P56645 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PER3P56645 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
PER3P56645 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PER3P56645 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PER3P56645 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.18■□□□□ 0.5
PER3P56645 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PER3P56645 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PER3P56645 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.18■□□□□ 0.5
PER3P56645 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PER3P56645 AL355075.4-201ENST00000554988 638 ntBASIC18.18■□□□□ 0.5
PER3P56645 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PER3P56645 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PER3P56645 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PER3P56645 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.18■□□□□ 0.5
PER3P56645 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.18■□□□□ 0.5
PER3P56645 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PER3P56645 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PER3P56645 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PER3P56645 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PER3P56645 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.18■□□□□ 0.5
PER3P56645 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PER3P56645 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PER3P56645 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.17■□□□□ 0.5
PER3P56645 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PER3P56645 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PER3P56645 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PER3P56645 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PER3P56645 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms