Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.88■□□□□ 0.45
SUMO3P55854 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.88■□□□□ 0.45
SUMO3P55854 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.88■□□□□ 0.45
SUMO3P55854 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SUMO3P55854 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.88■□□□□ 0.45
SUMO3P55854 FAM201B-201ENST00000458407 597 ntBASIC17.88■□□□□ 0.45
SUMO3P55854 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.88■□□□□ 0.45
SUMO3P55854 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.88■□□□□ 0.45
SUMO3P55854 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.88■□□□□ 0.45
SUMO3P55854 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.88■□□□□ 0.45
SUMO3P55854 MIR4651-201ENST00000582622 73 ntBASIC17.88■□□□□ 0.45
SUMO3P55854 MTDHP1-201ENST00000605323 784 ntBASIC17.88■□□□□ 0.45
SUMO3P55854 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SUMO3P55854 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SUMO3P55854 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SUMO3P55854 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SUMO3P55854 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SUMO3P55854 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SUMO3P55854 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SUMO3P55854 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.88■□□□□ 0.45
SUMO3P55854 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SUMO3P55854 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SUMO3P55854 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SUMO3P55854 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SUMO3P55854 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.87■□□□□ 0.45
SUMO3P55854 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.87■□□□□ 0.45
SUMO3P55854 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.87■□□□□ 0.45
SUMO3P55854 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.87■□□□□ 0.45
SUMO3P55854 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.87■□□□□ 0.45
SUMO3P55854 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.87■□□□□ 0.45
SUMO3P55854 AC006058.3-201ENST00000606217 1069 ntBASIC17.87■□□□□ 0.45
SUMO3P55854 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.87■□□□□ 0.45
SUMO3P55854 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.87■□□□□ 0.45
SUMO3P55854 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.87■□□□□ 0.45
SUMO3P55854 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.87■□□□□ 0.45
SUMO3P55854 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.87■□□□□ 0.45
SUMO3P55854 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SUMO3P55854 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.86■□□□□ 0.45
SUMO3P55854 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.86■□□□□ 0.45
SUMO3P55854 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.86■□□□□ 0.45
SUMO3P55854 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SUMO3P55854 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SUMO3P55854 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.86■□□□□ 0.45
SUMO3P55854 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SUMO3P55854 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.86■□□□□ 0.45
SUMO3P55854 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.86■□□□□ 0.45
SUMO3P55854 AC073648.6-201ENST00000641589 218 ntBASIC17.86■□□□□ 0.45
SUMO3P55854 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
SUMO3P55854 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.86■□□□□ 0.45
SUMO3P55854 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.86■□□□□ 0.45
SUMO3P55854 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.86■□□□□ 0.45
SUMO3P55854 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SUMO3P55854 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.86■□□□□ 0.45
SUMO3P55854 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.86■□□□□ 0.45
SUMO3P55854 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.86■□□□□ 0.45
SUMO3P55854 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SUMO3P55854 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUMO3P55854 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUMO3P55854 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
SUMO3P55854 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
SUMO3P55854 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SUMO3P55854 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUMO3P55854 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.85■□□□□ 0.45
SUMO3P55854 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUMO3P55854 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.85■□□□□ 0.45
SUMO3P55854 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SUMO3P55854 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.85■□□□□ 0.45
SUMO3P55854 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms