Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.48■□□□□ 0.71
CDKN2DP55273 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN2DP55273 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CDKN2DP55273 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN2DP55273 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN2DP55273 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN2DP55273 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN2DP55273 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN2DP55273 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CDKN2DP55273 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN2DP55273 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CDKN2DP55273 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKN2DP55273 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.48■□□□□ 0.71
CDKN2DP55273 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.47■□□□□ 0.71
CDKN2DP55273 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKN2DP55273 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.47■□□□□ 0.71
CDKN2DP55273 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CDKN2DP55273 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKN2DP55273 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKN2DP55273 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.47■□□□□ 0.71
CDKN2DP55273 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKN2DP55273 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKN2DP55273 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKN2DP55273 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.47■□□□□ 0.71
CDKN2DP55273 Z82202.1-201ENST00000623446 1880 ntBASIC19.47■□□□□ 0.71
CDKN2DP55273 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKN2DP55273 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKN2DP55273 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CDKN2DP55273 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKN2DP55273 AC087289.5-201ENST00000586076 3175 ntBASIC19.46■□□□□ 0.71
CDKN2DP55273 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKN2DP55273 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.46■□□□□ 0.71
CDKN2DP55273 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.46■□□□□ 0.71
CDKN2DP55273 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.46■□□□□ 0.71
CDKN2DP55273 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKN2DP55273 AC097658.1-201ENST00000475555 843 ntBASIC19.46■□□□□ 0.71
CDKN2DP55273 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.46■□□□□ 0.71
CDKN2DP55273 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.46■□□□□ 0.71
CDKN2DP55273 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.46■□□□□ 0.71
CDKN2DP55273 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CDKN2DP55273 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CDKN2DP55273 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKN2DP55273 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKN2DP55273 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKN2DP55273 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKN2DP55273 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKN2DP55273 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN2DP55273 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN2DP55273 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN2DP55273 TFP1-202ENST00000475455 1573 ntBASIC19.45■□□□□ 0.7
CDKN2DP55273 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDKN2DP55273 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN2DP55273 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDKN2DP55273 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKN2DP55273 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.45■□□□□ 0.7
CDKN2DP55273 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN2DP55273 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDKN2DP55273 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKN2DP55273 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.45■□□□□ 0.7
CDKN2DP55273 AC083880.1-201ENST00000608266 535 ntBASIC19.45■□□□□ 0.7
CDKN2DP55273 AL109923.1-201ENST00000618799 583 ntBASIC19.45■□□□□ 0.7
CDKN2DP55273 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN2DP55273 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CDKN2DP55273 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDKN2DP55273 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN2DP55273 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN2DP55273 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKN2DP55273 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKN2DP55273 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN2DP55273 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDKN2DP55273 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN2DP55273 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN2DP55273 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN2DP55273 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN2DP55273 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.44■□□□□ 0.7
CDKN2DP55273 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN2DP55273 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN2DP55273 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDKN2DP55273 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.44■□□□□ 0.7
CDKN2DP55273 AC090192.1-201ENST00000517740 490 ntBASIC19.44■□□□□ 0.7
CDKN2DP55273 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.44■□□□□ 0.7
CDKN2DP55273 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.44■□□□□ 0.7
CDKN2DP55273 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN2DP55273 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN2DP55273 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKN2DP55273 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.44■□□□□ 0.7
CDKN2DP55273 AC092368.3-202ENST00000574180 1591 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms