Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A6P48664 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A6P48664 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SLC1A6P48664 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A6P48664 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A6P48664 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A6P48664 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC1A6P48664 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC1A6P48664 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC1A6P48664 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC1A6P48664 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC1A6P48664 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC1A6P48664 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SLC1A6P48664 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC1A6P48664 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 TERF1P5-201ENST00000477545 1207 ntBASIC19.37■□□□□ 0.69
SLC1A6P48664 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC1A6P48664 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC1A6P48664 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SLC1A6P48664 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SLC1A6P48664 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SLC1A6P48664 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SLC1A6P48664 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC1A6P48664 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC1A6P48664 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC1A6P48664 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC1A6P48664 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC1A6P48664 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 AL138781.2-201ENST00000617896 1843 ntBASIC19.36■□□□□ 0.69
SLC1A6P48664 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SLC1A6P48664 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC1A6P48664 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC1A6P48664 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
SLC1A6P48664 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC1A6P48664 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SLC1A6P48664 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC1A6P48664 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC1A6P48664 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC1A6P48664 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC1A6P48664 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC1A6P48664 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.35■□□□□ 0.69
SLC1A6P48664 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A6P48664 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC1A6P48664 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SLC1A6P48664 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC1A6P48664 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC1A6P48664 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC1A6P48664 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.34■□□□□ 0.69
SLC1A6P48664 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC1A6P48664 AC016405.3-201ENST00000607710 860 ntBASIC19.34■□□□□ 0.69
SLC1A6P48664 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC1A6P48664 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A6P48664 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A6P48664 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
SLC1A6P48664 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms