Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RFX5P48382 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFX5P48382 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
RFX5P48382 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFX5P48382 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFX5P48382 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFX5P48382 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFX5P48382 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
RFX5P48382 FAM197Y1-201ENST00000421178 764 ntBASIC24.32■■□□□ 1.48
RFX5P48382 TUBB8P6-201ENST00000436895 1288 ntBASIC24.32■■□□□ 1.48
RFX5P48382 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
RFX5P48382 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC24.32■■□□□ 1.48
RFX5P48382 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
RFX5P48382 CD177P1-201ENST00000606252 935 ntBASIC24.32■■□□□ 1.48
RFX5P48382 AP001412.1-201ENST00000608405 714 ntBASIC24.32■■□□□ 1.48
RFX5P48382 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RFX5P48382 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
RFX5P48382 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFX5P48382 SRI-203ENST00000419179 1307 ntTSL 2 BASIC24.32■■□□□ 1.48
RFX5P48382 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RFX5P48382 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RFX5P48382 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFX5P48382 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.32■■□□□ 1.48
RFX5P48382 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.31■■□□□ 1.48
RFX5P48382 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.31■■□□□ 1.48
RFX5P48382 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.31■■□□□ 1.48
RFX5P48382 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.31■■□□□ 1.48
RFX5P48382 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC24.31■■□□□ 1.48
RFX5P48382 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFX5P48382 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFX5P48382 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RFX5P48382 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.31■■□□□ 1.48
RFX5P48382 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX5P48382 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX5P48382 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RFX5P48382 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.3■■□□□ 1.48
RFX5P48382 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX5P48382 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RFX5P48382 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.3■■□□□ 1.48
RFX5P48382 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.3■■□□□ 1.48
RFX5P48382 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.3■■□□□ 1.48
RFX5P48382 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.3■■□□□ 1.48
RFX5P48382 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RFX5P48382 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.3■■□□□ 1.48
RFX5P48382 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.3■■□□□ 1.48
RFX5P48382 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC24.3■■□□□ 1.48
RFX5P48382 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RFX5P48382 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
RFX5P48382 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX5P48382 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX5P48382 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
RFX5P48382 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFX5P48382 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
RFX5P48382 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.29■■□□□ 1.48
RFX5P48382 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RFX5P48382 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.29■■□□□ 1.48
RFX5P48382 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC24.29■■□□□ 1.48
RFX5P48382 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.29■■□□□ 1.48
RFX5P48382 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RFX5P48382 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RFX5P48382 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RFX5P48382 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RFX5P48382 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
RFX5P48382 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RFX5P48382 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RFX5P48382 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RFX5P48382 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RFX5P48382 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
RFX5P48382 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RFX5P48382 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RFX5P48382 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RFX5P48382 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
RFX5P48382 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.28■■□□□ 1.48
RFX5P48382 AP002982.1-201ENST00000492365 877 ntBASIC24.28■■□□□ 1.48
RFX5P48382 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC24.28■■□□□ 1.48
RFX5P48382 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.28■■□□□ 1.48
RFX5P48382 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.28■■□□□ 1.48
RFX5P48382 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
RFX5P48382 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RFX5P48382 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RFX5P48382 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.27■■□□□ 1.48
RFX5P48382 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.27■■□□□ 1.48
RFX5P48382 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RFX5P48382 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RFX5P48382 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.27■■□□□ 1.48
RFX5P48382 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RFX5P48382 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RFX5P48382 KSR1P1-201ENST00000446298 240 ntBASIC24.27■■□□□ 1.48
RFX5P48382 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RFX5P48382 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.27■■□□□ 1.48
RFX5P48382 AC026471.5-201ENST00000615068 467 ntBASIC24.27■■□□□ 1.48
RFX5P48382 HLA-A-209ENST00000638375 975 ntBASIC24.27■■□□□ 1.48
RFX5P48382 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RFX5P48382 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RFX5P48382 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC24.27■■□□□ 1.48
RFX5P48382 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RFX5P48382 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RFX5P48382 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
RFX5P48382 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.26■■□□□ 1.47
RFX5P48382 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms