Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC8.64□□□□□ -1.034e-6■■■■□ 21.2
MATR3P43243 FER-204ENST00000504143 3132 ntTSL 54.76□□□□□ -1.654e-6■■■■□ 21.2
MATR3P43243 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.734e-6■■■■□ 21.2
MATR3P43243 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.08□□□□□ -1.764e-6■■■■□ 21.2
MATR3P43243 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.183e-6■■■■□ 21.2
MATR3P43243 DTNBP1-211ENST00000515875 1306 ntTSL 528.64■■■□□ 2.173e-6■■■■□ 21.2
MATR3P43243 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.76■■■□□ 2.033e-6■■■■□ 21.2
MATR3P43243 IRAK1-201ENST00000369973 2358 ntTSL 527.05■■□□□ 1.923e-6■■■■□ 21.2
MATR3P43243 DTNBP1-208ENST00000511762 843 ntTSL 326.84■■□□□ 1.893e-6■■■■□ 21.2
MATR3P43243 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.81■■□□□ 1.883e-6■■■■□ 21.2
MATR3P43243 DTNBP1-209ENST00000513680 1518 ntTSL 525.82■■□□□ 1.723e-6■■■■□ 21.2
MATR3P43243 TTC13-205ENST00000481976 1062 ntTSL 525.32■■□□□ 1.643e-6■■■■□ 21.2
MATR3P43243 TTC13-209ENST00000522821 558 ntTSL 425.32■■□□□ 1.643e-6■■■■□ 21.2
MATR3P43243 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.16■■□□□ 1.33e-6■■■■□ 21.2
MATR3P43243 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.183e-6■■■■□ 21.2
MATR3P43243 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.35■■□□□ 1.173e-6■■■■□ 21.2
MATR3P43243 IRAK1-210ENST00000455690 784 ntTSL 321.51■■□□□ 1.033e-6■■■■□ 21.2
MATR3P43243 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.07■□□□□ 0.963e-6■■■■□ 21.2
MATR3P43243 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.773e-6■■■■□ 21.2
MATR3P43243 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.66■□□□□ 0.743e-6■■■■□ 21.2
MATR3P43243 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.672e-10■■■■□ 21.2
MATR3P43243 IRAK1-208ENST00000444230 1125 ntTSL 518.92■□□□□ 0.623e-6■■■■□ 21.2
MATR3P43243 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.613e-6■■■■□ 21.2
MATR3P43243 DTNBP1-207ENST00000510395 1404 ntTSL 218.75■□□□□ 0.593e-6■■■■□ 21.2
MATR3P43243 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.553e-6■■■■□ 21.2
MATR3P43243 DTNBP1-205ENST00000506844 1542 ntTSL 1 (best)18.13■□□□□ 0.493e-6■■■■□ 21.2
MATR3P43243 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.9■□□□□ 0.463e-6■■■■□ 21.2
MATR3P43243 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.393e-6■■■■□ 21.2
MATR3P43243 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.31■□□□□ 0.363e-6■■■■□ 21.2
MATR3P43243 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.333e-6■■■■□ 21.2
MATR3P43243 MED10-202ENST00000503112 925 ntTSL 216.73■□□□□ 0.273e-6■■■■□ 21.2
MATR3P43243 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.31■□□□□ 0.23e-6■■■■□ 21.2
MATR3P43243 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.14■□□□□ 0.173e-6■■■■□ 21.2
MATR3P43243 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.66■□□□□ 0.13e-6■■■■□ 21.2
MATR3P43243 IRAK1-207ENST00000443220 1175 ntTSL 215.57■□□□□ 0.083e-6■■■■□ 21.2
MATR3P43243 IRAK1-206ENST00000437278 862 ntTSL 515.4■□□□□ 0.063e-6■■■■□ 21.2
MATR3P43243 IRAK1-213ENST00000477274 705 ntTSL 513.94□□□□□ -0.183e-6■■■■□ 21.2
MATR3P43243 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC13.42□□□□□ -0.263e-6■■■■□ 21.2
MATR3P43243 GUSBP1-201ENST00000449061 758 ntBASIC12.6□□□□□ -0.393e-6■■■■□ 21.2
MATR3P43243 MICA-208ENST00000421350 1005 ntTSL 512.42□□□□□ -0.422e-10■■■■□ 21.2
MATR3P43243 DTNBP1-204ENST00000462989 1010 ntTSL 3 BASIC11.59□□□□□ -0.553e-6■■■■□ 21.2
MATR3P43243 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC9.91□□□□□ -0.823e-6■■■■□ 21.2
MATR3P43243 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC9.17□□□□□ -0.943e-6■■■■□ 21.2
MATR3P43243 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.93□□□□□ -0.983e-6■■■■□ 21.2
MATR3P43243 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.76□□□□□ -1.173e-6■■■■□ 21.2
MATR3P43243 TTC17-208ENST00000526774 3360 ntTSL 1 (best)6.31□□□□□ -1.48e-7■■■■□ 21.2
MATR3P43243 ARHGAP11A-206ENST00000564918 572 ntTSL 34.18□□□□□ -1.743e-6■■■■□ 21.2
MATR3P43243 SUPT3H-204ENST00000459689 396 ntTSL 23.98□□□□□ -1.775e-7■■■■□ 21.2
MATR3P43243 ARHGAP11A-203ENST00000562481 620 ntTSL 33.67□□□□□ -1.823e-6■■■■□ 21.2
MATR3P43243 TTC13-207ENST00000519379 526 ntTSL 43.08□□□□□ -1.923e-6■■■■□ 21.2
MATR3P43243 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.78□□□□□ -1.963e-6■■■■□ 21.2
MATR3P43243 ZFHX3-205ENST00000563625 455 ntTSL 311.52□□□□□ -0.572e-6■■■■□ 21.1
MATR3P43243 CDYL-207ENST00000472453 1764 ntTSL 1 (best)27.81■■■□□ 2.046e-7■■■■□ 21.1
MATR3P43243 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.626e-7■■■■□ 21.1
MATR3P43243 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC11.15□□□□□ -0.626e-7■■■■□ 21.1
MATR3P43243 CDYL-208ENST00000483019 773 ntTSL 210.43□□□□□ -0.746e-7■■■■□ 21.1
MATR3P43243 CDYL-204ENST00000440139 690 ntTSL 38.93□□□□□ -0.986e-7■■■■□ 21.1
MATR3P43243 CDYL-209ENST00000491864 614 ntTSL 57.24□□□□□ -1.256e-7■■■■□ 21.1
MATR3P43243 KDM5D-209ENST00000492117 5235 ntTSL 213.73□□□□□ -0.212e-6■■■■□ 21.1
MATR3P43243 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.292e-6■■■■□ 21.1
MATR3P43243 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.332e-6■■■■□ 21.1
MATR3P43243 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.432e-6■■■■□ 21.1
MATR3P43243 KDM5D-206ENST00000469599 5501 ntTSL 212.2□□□□□ -0.462e-6■■■■□ 21.1
MATR3P43243 KDM5D-204ENST00000440077 4701 ntAPPRIS ALT2 TSL 510.33□□□□□ -0.762e-6■■■■□ 21.1
MATR3P43243 FANCL-210ENST00000481670 522 ntTSL 34.55□□□□□ -1.681e-6■■■■□ 21.1
MATR3P43243 PDE4D-220ENST00000512069 536 ntTSL 23.95□□□□□ -1.783e-6■■■■□ 21.1
MATR3P43243 CMC1-201ENST00000334841 724 ntTSL 316.53■□□□□ 0.242e-6■■■■□ 21.1
MATR3P43243 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.74■□□□□ 0.112e-6■■■■□ 21.1
MATR3P43243 CMC1-205ENST00000466830 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.362e-6■■■■□ 21.1
MATR3P43243 CMC1-209ENST00000477739 3749 ntTSL 1 (best)11.21□□□□□ -0.612e-6■■■■□ 21.1
MATR3P43243 CMC1-203ENST00000418849 484 ntTSL 32.53□□□□□ -22e-6■■■■□ 21.1
MATR3P43243 PPP2R2A-218ENST00000522535 653 ntTSL 424.9■■□□□ 1.583e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-206ENST00000518254 755 ntTSL 515.19■□□□□ 0.023e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-211ENST00000520329 836 ntTSL 515.19■□□□□ 0.023e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-223ENST00000524169 784 ntTSL 314.69□□□□□ -0.063e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-207ENST00000518397 830 ntTSL 510.36□□□□□ -0.753e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.773e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-209ENST00000519439 658 ntTSL 36.18□□□□□ -1.423e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-219ENST00000523473 654 ntTSL 45.78□□□□□ -1.483e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-213ENST00000521095 579 ntTSL 35.61□□□□□ -1.513e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-215ENST00000521557 601 ntTSL 45.29□□□□□ -1.563e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.573e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-222ENST00000524099 569 ntTSL 45.18□□□□□ -1.583e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-216ENST00000522150 573 ntTSL 54.08□□□□□ -1.763e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-220ENST00000523925 529 ntTSL 33.82□□□□□ -1.83e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-221ENST00000523964 567 ntTSL 43.16□□□□□ -1.93e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-214ENST00000521484 556 ntTSL 42.99□□□□□ -1.933e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-210ENST00000519636 575 ntTSL 52.99□□□□□ -1.933e-7■■■■□ 21.1
MATR3P43243 PPP2R2A-217ENST00000522482 576 ntTSL 42.2□□□□□ -2.063e-7■■■■□ 21.1
MATR3P43243 SHANK2-208ENST00000426687 460 ntTSL 59.46□□□□□ -0.98e-7■■■■□ 21.1
MATR3P43243 NCOR2-207ENST00000420698 1752 ntTSL 217.56■□□□□ 0.44e-7■■■■□ 21.1
MATR3P43243 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.314e-7■■■■□ 21.1
MATR3P43243 NCOR2-215ENST00000458234 4675 ntAPPRIS ALT2 TSL 1 (best)16.13■□□□□ 0.174e-7■■■■□ 21.1
MATR3P43243 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.074e-7■■■■□ 21.1
MATR3P43243 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.064e-7■■■■□ 21.1
MATR3P43243 NCOR2-212ENST00000448008 735 ntTSL 515.23■□□□□ 0.034e-7■■■■□ 21.1
MATR3P43243 NCOR2-224ENST00000542927 828 ntTSL 313.6□□□□□ -0.234e-7■■■■□ 21.1
MATR3P43243 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC10.14□□□□□ -0.793e-8■■■■□ 21.1
MATR3P43243 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC9.58□□□□□ -0.883e-8■■■■□ 21.1
MATR3P43243 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC9.41□□□□□ -0.93e-8■■■■□ 21.1
Retrieved 100 of 16,209 protein–RNA pairs in 79.3 ms