Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.81■□□□□ 0.76
CCNFP41002 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCNFP41002 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.81■□□□□ 0.76
CCNFP41002 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNFP41002 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNFP41002 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.81■□□□□ 0.76
CCNFP41002 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.81■□□□□ 0.76
CCNFP41002 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.81■□□□□ 0.76
CCNFP41002 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.81■□□□□ 0.76
CCNFP41002 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNFP41002 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.81■□□□□ 0.76
CCNFP41002 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNFP41002 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNFP41002 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CCNFP41002 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCNFP41002 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNFP41002 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNFP41002 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.81■□□□□ 0.76
CCNFP41002 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.81■□□□□ 0.76
CCNFP41002 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNFP41002 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNFP41002 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNFP41002 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNFP41002 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCNFP41002 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CCNFP41002 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCNFP41002 AL355472.2-201ENST00000422958 438 ntBASIC19.8■□□□□ 0.76
CCNFP41002 TSPY6P-201ENST00000448518 926 ntBASIC19.8■□□□□ 0.76
CCNFP41002 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNFP41002 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNFP41002 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNFP41002 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.8■□□□□ 0.76
CCNFP41002 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.8■□□□□ 0.76
CCNFP41002 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNFP41002 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNFP41002 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNFP41002 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCNFP41002 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNFP41002 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNFP41002 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNFP41002 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNFP41002 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNFP41002 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCNFP41002 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNFP41002 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCNFP41002 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNFP41002 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNFP41002 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNFP41002 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNFP41002 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNFP41002 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNFP41002 LSM12P1-201ENST00000411836 588 ntBASIC19.79■□□□□ 0.76
CCNFP41002 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.79■□□□□ 0.76
CCNFP41002 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCNFP41002 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNFP41002 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.79■□□□□ 0.76
CCNFP41002 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCNFP41002 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCNFP41002 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNFP41002 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNFP41002 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNFP41002 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.78■□□□□ 0.76
CCNFP41002 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CCNFP41002 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNFP41002 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCNFP41002 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCNFP41002 BX276092.2-201ENST00000417668 665 ntBASIC19.78■□□□□ 0.76
CCNFP41002 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNFP41002 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.78■□□□□ 0.76
CCNFP41002 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCNFP41002 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CCNFP41002 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.78■□□□□ 0.76
CCNFP41002 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNFP41002 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNFP41002 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNFP41002 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CCNFP41002 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms