Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC005829.2-201ENST00000571422 1056 ntBASIC19.94■□□□□ 0.78
HADHAP40939 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HADHAP40939 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HADHAP40939 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HADHAP40939 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.94■□□□□ 0.78
HADHAP40939 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HADHAP40939 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HADHAP40939 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.94■□□□□ 0.78
HADHAP40939 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HADHAP40939 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HADHAP40939 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HADHAP40939 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.94■□□□□ 0.78
HADHAP40939 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HADHAP40939 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HADHAP40939 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HADHAP40939 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.93■□□□□ 0.78
HADHAP40939 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.93■□□□□ 0.78
HADHAP40939 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.93■□□□□ 0.78
HADHAP40939 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.93■□□□□ 0.78
HADHAP40939 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.93■□□□□ 0.78
HADHAP40939 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HADHAP40939 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HADHAP40939 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HADHAP40939 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HADHAP40939 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.92■□□□□ 0.78
HADHAP40939 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
HADHAP40939 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HADHAP40939 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HADHAP40939 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HADHAP40939 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HADHAP40939 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HADHAP40939 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HADHAP40939 AC083880.1-201ENST00000608266 535 ntBASIC19.92■□□□□ 0.78
HADHAP40939 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HADHAP40939 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HADHAP40939 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.92■□□□□ 0.78
HADHAP40939 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.92■□□□□ 0.78
HADHAP40939 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HADHAP40939 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HADHAP40939 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.92■□□□□ 0.78
HADHAP40939 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.92■□□□□ 0.78
HADHAP40939 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HADHAP40939 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHAP40939 AC009237.14-201ENST00000609975 1594 ntBASIC19.91■□□□□ 0.78
HADHAP40939 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHAP40939 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHAP40939 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.91■□□□□ 0.78
HADHAP40939 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HADHAP40939 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHAP40939 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.91■□□□□ 0.78
HADHAP40939 AL158211.5-201ENST00000623583 2518 ntBASIC19.91■□□□□ 0.78
HADHAP40939 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.91■□□□□ 0.78
HADHAP40939 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHAP40939 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.91■□□□□ 0.78
HADHAP40939 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.91■□□□□ 0.78
HADHAP40939 AC060766.5-201ENST00000590539 871 ntBASIC19.91■□□□□ 0.78
HADHAP40939 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HADHAP40939 AC092368.3-202ENST00000574180 1591 ntBASIC19.91■□□□□ 0.78
HADHAP40939 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHAP40939 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HADHAP40939 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 BX323043.1-201ENST00000641006 1765 ntBASIC19.9■□□□□ 0.78
HADHAP40939 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.9■□□□□ 0.78
HADHAP40939 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.9■□□□□ 0.78
HADHAP40939 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.9■□□□□ 0.78
HADHAP40939 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.9■□□□□ 0.78
HADHAP40939 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.9■□□□□ 0.78
HADHAP40939 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.9■□□□□ 0.78
HADHAP40939 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HADHAP40939 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HADHAP40939 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.9■□□□□ 0.78
HADHAP40939 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HADHAP40939 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HADHAP40939 AC116562.4-201ENST00000641316 2276 ntBASIC19.9■□□□□ 0.78
HADHAP40939 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HADHAP40939 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HADHAP40939 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HADHAP40939 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HADHAP40939 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms