Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
EPHA3P29320 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.17■□□□□ 0.66
EPHA3P29320 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.17■□□□□ 0.66
EPHA3P29320 AL031963.3-201ENST00000606441 850 ntBASIC19.17■□□□□ 0.66
EPHA3P29320 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.17■□□□□ 0.66
EPHA3P29320 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
EPHA3P29320 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EPHA3P29320 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
EPHA3P29320 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
EPHA3P29320 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.16■□□□□ 0.66
EPHA3P29320 AC010536.3-201ENST00000620306 533 ntBASIC19.16■□□□□ 0.66
EPHA3P29320 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 KRT8P20-201ENST00000423953 1409 ntBASIC19.16■□□□□ 0.66
EPHA3P29320 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
EPHA3P29320 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA3P29320 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.15■□□□□ 0.66
EPHA3P29320 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.15■□□□□ 0.66
EPHA3P29320 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.15■□□□□ 0.66
EPHA3P29320 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.15■□□□□ 0.66
EPHA3P29320 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.15■□□□□ 0.66
EPHA3P29320 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
EPHA3P29320 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.15■□□□□ 0.66
EPHA3P29320 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
EPHA3P29320 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA3P29320 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.14■□□□□ 0.66
EPHA3P29320 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.14■□□□□ 0.66
EPHA3P29320 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
EPHA3P29320 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA3P29320 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.14■□□□□ 0.65
EPHA3P29320 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
EPHA3P29320 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA3P29320 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
EPHA3P29320 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA3P29320 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.14■□□□□ 0.65
EPHA3P29320 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHA3P29320 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHA3P29320 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA3P29320 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
EPHA3P29320 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA3P29320 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
EPHA3P29320 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA3P29320 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHA3P29320 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA3P29320 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA3P29320 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA3P29320 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.14■□□□□ 0.65
EPHA3P29320 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
EPHA3P29320 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.13■□□□□ 0.65
EPHA3P29320 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHA3P29320 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.13■□□□□ 0.65
EPHA3P29320 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHA3P29320 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
EPHA3P29320 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHA3P29320 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EPHA3P29320 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.13■□□□□ 0.65
EPHA3P29320 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.13■□□□□ 0.65
EPHA3P29320 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EPHA3P29320 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
EPHA3P29320 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHA3P29320 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHA3P29320 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EPHA3P29320 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms