Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 CYP2T1P-201ENST00000432607 1285 ntBASIC18.3■□□□□ 0.52
TNFRSF1BP20333 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.3■□□□□ 0.52
TNFRSF1BP20333 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 AC100791.3-201ENST00000617619 330 ntBASIC18.3■□□□□ 0.52
TNFRSF1BP20333 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 AC093503.3-201ENST00000624917 2352 ntBASIC18.3■□□□□ 0.52
TNFRSF1BP20333 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 AC016769.1-201ENST00000409132 1010 ntBASIC18.29■□□□□ 0.52
TNFRSF1BP20333 CYP2T3P-201ENST00000601990 817 ntBASIC18.29■□□□□ 0.52
TNFRSF1BP20333 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 AP001271.2-201ENST00000624018 1556 ntBASIC18.29■□□□□ 0.52
TNFRSF1BP20333 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TNFRSF1BP20333 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.28■□□□□ 0.52
TNFRSF1BP20333 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TNFRSF1BP20333 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNFRSF1BP20333 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNFRSF1BP20333 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TNFRSF1BP20333 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNFRSF1BP20333 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms