Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD58P19256 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
CD58P19256 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CD58P19256 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CD58P19256 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.16■□□□□ 0.98
CD58P19256 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.16■□□□□ 0.98
CD58P19256 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 AC116351.2-201ENST00000606540 1585 ntBASIC21.16■□□□□ 0.98
CD58P19256 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.16■□□□□ 0.98
CD58P19256 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 KRT17P3-201ENST00000420566 1262 ntBASIC21.16■□□□□ 0.98
CD58P19256 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.16■□□□□ 0.98
CD58P19256 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.16■□□□□ 0.98
CD58P19256 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CD58P19256 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.16■□□□□ 0.98
CD58P19256 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
CD58P19256 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.16■□□□□ 0.98
CD58P19256 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.16■□□□□ 0.98
CD58P19256 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD58P19256 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.15■□□□□ 0.98
CD58P19256 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.15■□□□□ 0.98
CD58P19256 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD58P19256 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD58P19256 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD58P19256 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD58P19256 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD58P19256 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.15■□□□□ 0.98
CD58P19256 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.15■□□□□ 0.98
CD58P19256 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.15■□□□□ 0.98
CD58P19256 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD58P19256 AC069544.1-201ENST00000609399 999 ntBASIC21.15■□□□□ 0.98
CD58P19256 AC073648.6-201ENST00000641589 218 ntBASIC21.15■□□□□ 0.98
CD58P19256 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.15■□□□□ 0.98
CD58P19256 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.15■□□□□ 0.98
CD58P19256 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD58P19256 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CD58P19256 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CD58P19256 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD58P19256 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.15■□□□□ 0.98
CD58P19256 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.14■□□□□ 0.98
CD58P19256 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CD58P19256 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.14■□□□□ 0.98
CD58P19256 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CD58P19256 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CD58P19256 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.14■□□□□ 0.97
CD58P19256 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.14■□□□□ 0.97
CD58P19256 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.14■□□□□ 0.97
CD58P19256 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.14■□□□□ 0.97
CD58P19256 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.14■□□□□ 0.97
CD58P19256 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 AL121906.2-201ENST00000621597 723 ntBASIC21.14■□□□□ 0.97
CD58P19256 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD58P19256 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.14■□□□□ 0.97
CD58P19256 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.14■□□□□ 0.97
CD58P19256 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD58P19256 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.13■□□□□ 0.97
CD58P19256 AIRN-201ENST00000601203 4374 ntBASIC21.13■□□□□ 0.97
CD58P19256 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CD58P19256 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CD58P19256 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CD58P19256 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD58P19256 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CD58P19256 AC128676.1-201ENST00000454392 318 ntBASIC21.13■□□□□ 0.97
CD58P19256 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.13■□□□□ 0.97
CD58P19256 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD58P19256 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD58P19256 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.13■□□□□ 0.97
CD58P19256 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD58P19256 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD58P19256 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.13■□□□□ 0.97
CD58P19256 AP001271.2-201ENST00000624018 1556 ntBASIC21.13■□□□□ 0.97
CD58P19256 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.13■□□□□ 0.97
CD58P19256 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CD58P19256 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD58P19256 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CD58P19256 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CD58P19256 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.13■□□□□ 0.97
CD58P19256 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.13■□□□□ 0.97
CD58P19256 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CD58P19256 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CD58P19256 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms