Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.53■□□□□ 0.56
TPRP12270 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.53■□□□□ 0.56
TPRP12270 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPRP12270 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPRP12270 IL9RP2-201ENST00000423948 1312 ntBASIC18.53■□□□□ 0.56
TPRP12270 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.53■□□□□ 0.56
TPRP12270 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPRP12270 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.53■□□□□ 0.56
TPRP12270 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TPRP12270 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.53■□□□□ 0.56
TPRP12270 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
TPRP12270 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPRP12270 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
TPRP12270 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.53■□□□□ 0.56
TPRP12270 TERC-201ENST00000602385 541 ntBASIC18.53■□□□□ 0.56
TPRP12270 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPRP12270 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPRP12270 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPRP12270 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPRP12270 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TPRP12270 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TPRP12270 AP000523.1-201ENST00000398242 1049 ntBASIC18.52■□□□□ 0.56
TPRP12270 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TPRP12270 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPRP12270 AC112907.2-201ENST00000448639 330 ntBASIC18.52■□□□□ 0.56
TPRP12270 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.52■□□□□ 0.56
TPRP12270 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TPRP12270 TPSP2-201ENST00000561760 610 ntBASIC18.52■□□□□ 0.56
TPRP12270 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TPRP12270 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPRP12270 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TPRP12270 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TPRP12270 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.52■□□□□ 0.56
TPRP12270 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TPRP12270 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.52■□□□□ 0.55
TPRP12270 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TPRP12270 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TPRP12270 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.52■□□□□ 0.55
TPRP12270 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.52■□□□□ 0.55
TPRP12270 AC055717.3-201ENST00000622967 595 ntBASIC18.52■□□□□ 0.55
TPRP12270 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.52■□□□□ 0.55
TPRP12270 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 PMS2P7-201ENST00000506558 1336 ntBASIC18.51■□□□□ 0.55
TPRP12270 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TPRP12270 AC093323.1-202ENST00000635031 2045 ntBASIC18.51■□□□□ 0.55
TPRP12270 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.51■□□□□ 0.55
TPRP12270 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 AL390719.2-201ENST00000606993 987 ntBASIC18.51■□□□□ 0.55
TPRP12270 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.51■□□□□ 0.55
TPRP12270 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TPRP12270 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPRP12270 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPRP12270 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TPRP12270 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPRP12270 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
TPRP12270 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.5■□□□□ 0.55
TPRP12270 AC239800.4-201ENST00000603712 296 ntBASIC18.5■□□□□ 0.55
TPRP12270 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TPRP12270 AC026471.6-201ENST00000622954 1905 ntBASIC18.5■□□□□ 0.55
TPRP12270 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPRP12270 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.5■□□□□ 0.55
TPRP12270 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPRP12270 AL645929.1-201ENST00000420084 975 ntBASIC18.5■□□□□ 0.55
TPRP12270 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.5■□□□□ 0.55
TPRP12270 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TPRP12270 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.5■□□□□ 0.55
TPRP12270 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPRP12270 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TPRP12270 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.5■□□□□ 0.55
TPRP12270 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPRP12270 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPRP12270 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TPRP12270 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPRP12270 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.49■□□□□ 0.55
TPRP12270 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPRP12270 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPRP12270 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPRP12270 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPRP12270 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.49■□□□□ 0.55
TPRP12270 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.49■□□□□ 0.55
TPRP12270 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.49■□□□□ 0.55
TPRP12270 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.49■□□□□ 0.55
TPRP12270 LINC01711-201ENST00000598340 967 ntBASIC18.49■□□□□ 0.55
TPRP12270 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPRP12270 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.49■□□□□ 0.55
TPRP12270 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPRP12270 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TPRP12270 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPRP12270 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.49■□□□□ 0.55
TPRP12270 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPRP12270 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms