Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM17P0DL12 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM17P0DL12 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SMIM17P0DL12 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.66□□□□□ -0.06
SMIM17P0DL12 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM17P0DL12 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM17P0DL12 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM17P0DL12 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SMIM17P0DL12 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM17P0DL12 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM17P0DL12 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM17P0DL12 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM17P0DL12 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 RASA4CP-201ENST00000424092 1398 ntBASIC14.65□□□□□ -0.06
SMIM17P0DL12 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.65□□□□□ -0.06
SMIM17P0DL12 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM17P0DL12 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 EDA-201ENST00000338901 1233 ntBASIC14.64□□□□□ -0.07
SMIM17P0DL12 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.64□□□□□ -0.07
SMIM17P0DL12 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 AC012414.1-201ENST00000556676 535 ntBASIC14.64□□□□□ -0.07
SMIM17P0DL12 RARRES2P11-201ENST00000635158 484 ntBASIC14.64□□□□□ -0.07
SMIM17P0DL12 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 OR6D1P-203ENST00000641209 4860 ntBASIC14.64□□□□□ -0.07
SMIM17P0DL12 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.64□□□□□ -0.07
SMIM17P0DL12 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM17P0DL12 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SMIM17P0DL12 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 AC008406.3-201ENST00000620001 1374 ntBASIC14.63□□□□□ -0.07
SMIM17P0DL12 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.63□□□□□ -0.07
SMIM17P0DL12 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SMIM17P0DL12 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.63□□□□□ -0.07
SMIM17P0DL12 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM17P0DL12 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.63□□□□□ -0.07
SMIM17P0DL12 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.63□□□□□ -0.07
SMIM17P0DL12 AL355001.2-201ENST00000620617 1191 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms