Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RCC2P6-201ENST00000526625 1557 ntBASIC22.35■■□□□ 1.17
HOXC6P09630 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
HOXC6P09630 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
HOXC6P09630 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.35■■□□□ 1.17
HOXC6P09630 LINC01238-205ENST00000567549 1107 ntBASIC22.35■■□□□ 1.17
HOXC6P09630 AL138966.2-201ENST00000621997 464 ntBASIC22.35■■□□□ 1.17
HOXC6P09630 MYC-208ENST00000641036 567 ntBASIC22.35■■□□□ 1.17
HOXC6P09630 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HOXC6P09630 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.35■■□□□ 1.17
HOXC6P09630 AC096733.2-201ENST00000609937 1394 ntBASIC22.35■■□□□ 1.17
HOXC6P09630 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HOXC6P09630 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.35■■□□□ 1.17
HOXC6P09630 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HOXC6P09630 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.34■■□□□ 1.17
HOXC6P09630 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.34■■□□□ 1.17
HOXC6P09630 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.34■■□□□ 1.17
HOXC6P09630 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 DPP3P2-201ENST00000416030 1696 ntBASIC22.34■■□□□ 1.17
HOXC6P09630 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
HOXC6P09630 FAM8A6P-201ENST00000407496 1135 ntBASIC22.34■■□□□ 1.17
HOXC6P09630 AC117947.1-201ENST00000427448 529 ntBASIC22.34■■□□□ 1.17
HOXC6P09630 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.34■■□□□ 1.17
HOXC6P09630 AC008040.2-201ENST00000461049 708 ntBASIC22.34■■□□□ 1.17
HOXC6P09630 AC091390.4-202ENST00000476426 537 ntBASIC22.34■■□□□ 1.17
HOXC6P09630 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC22.34■■□□□ 1.17
HOXC6P09630 SLC25A1P4-201ENST00000567977 778 ntBASIC22.34■■□□□ 1.17
HOXC6P09630 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
HOXC6P09630 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
HOXC6P09630 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.34■■□□□ 1.17
HOXC6P09630 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HOXC6P09630 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
HOXC6P09630 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.33■■□□□ 1.17
HOXC6P09630 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HOXC6P09630 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HOXC6P09630 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.33■■□□□ 1.17
HOXC6P09630 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.33■■□□□ 1.17
HOXC6P09630 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HOXC6P09630 HLA-A-209ENST00000638375 975 ntBASIC22.33■■□□□ 1.17
HOXC6P09630 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HOXC6P09630 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HOXC6P09630 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
HOXC6P09630 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.33■■□□□ 1.16
HOXC6P09630 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.32■■□□□ 1.16
HOXC6P09630 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.32■■□□□ 1.16
HOXC6P09630 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
HOXC6P09630 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC22.32■■□□□ 1.16
HOXC6P09630 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 AC091076.1-201ENST00000610741 619 ntBASIC22.32■■□□□ 1.16
HOXC6P09630 AC011298.2-201ENST00000617989 482 ntBASIC22.32■■□□□ 1.16
HOXC6P09630 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HOXC6P09630 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HOXC6P09630 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HOXC6P09630 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HOXC6P09630 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
HOXC6P09630 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.31■■□□□ 1.16
HOXC6P09630 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.31■■□□□ 1.16
HOXC6P09630 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
HOXC6P09630 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HOXC6P09630 AC004951.3-201ENST00000418645 1148 ntBASIC22.31■■□□□ 1.16
HOXC6P09630 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.31■■□□□ 1.16
HOXC6P09630 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.31■■□□□ 1.16
HOXC6P09630 AC116562.4-202ENST00000641738 218 ntBASIC22.31■■□□□ 1.16
HOXC6P09630 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.31■■□□□ 1.16
HOXC6P09630 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HOXC6P09630 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HOXC6P09630 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
HOXC6P09630 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HOXC6P09630 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HOXC6P09630 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.3■■□□□ 1.16
HOXC6P09630 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.3■■□□□ 1.16
HOXC6P09630 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HOXC6P09630 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HOXC6P09630 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
HOXC6P09630 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HOXC6P09630 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HOXC6P09630 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
HOXC6P09630 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.3■■□□□ 1.16
HOXC6P09630 SLC25A1P2-201ENST00000430693 912 ntBASIC22.3■■□□□ 1.16
HOXC6P09630 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
HOXC6P09630 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.3■■□□□ 1.16
HOXC6P09630 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.3■■□□□ 1.16
HOXC6P09630 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms