Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.99■□□□□ 0.79
COL4A2P08572 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COL4A2P08572 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
COL4A2P08572 KRT16P6-202ENST00000425692 1426 ntBASIC19.99■□□□□ 0.79
COL4A2P08572 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A2P08572 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.99■□□□□ 0.79
COL4A2P08572 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.99■□□□□ 0.79
COL4A2P08572 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A2P08572 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A2P08572 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A2P08572 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
COL4A2P08572 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A2P08572 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A2P08572 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A2P08572 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.99■□□□□ 0.79
COL4A2P08572 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A2P08572 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A2P08572 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A2P08572 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
COL4A2P08572 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL4A2P08572 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL4A2P08572 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A2P08572 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A2P08572 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A2P08572 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL4A2P08572 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A2P08572 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
COL4A2P08572 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A2P08572 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A2P08572 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A2P08572 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A2P08572 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.98■□□□□ 0.79
COL4A2P08572 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A2P08572 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.98■□□□□ 0.79
COL4A2P08572 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A2P08572 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL4A2P08572 DUSP5P1-201ENST00000441325 1139 ntBASIC19.97■□□□□ 0.79
COL4A2P08572 CCR12P-201ENST00000446203 998 ntBASIC19.97■□□□□ 0.79
COL4A2P08572 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.97■□□□□ 0.79
COL4A2P08572 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A2P08572 AC008622.2-201ENST00000617006 1229 ntBASIC19.97■□□□□ 0.79
COL4A2P08572 AP000550.4-202ENST00000639755 178 ntBASIC19.97■□□□□ 0.79
COL4A2P08572 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A2P08572 AC007225.1-201ENST00000566331 1836 ntBASIC19.97■□□□□ 0.79
COL4A2P08572 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A2P08572 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL4A2P08572 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A2P08572 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.97■□□□□ 0.79
COL4A2P08572 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A2P08572 KRT8P8-201ENST00000434750 1448 ntBASIC19.97■□□□□ 0.79
COL4A2P08572 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A2P08572 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.96■□□□□ 0.79
COL4A2P08572 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.96■□□□□ 0.79
COL4A2P08572 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL4A2P08572 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 AC116407.4-201ENST00000623319 1061 ntBASIC19.96■□□□□ 0.79
COL4A2P08572 AC141257.4-201ENST00000634557 245 ntBASIC19.96■□□□□ 0.79
COL4A2P08572 AC136944.6-201ENST00000634818 245 ntBASIC19.96■□□□□ 0.79
COL4A2P08572 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COL4A2P08572 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A2P08572 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A2P08572 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.96■□□□□ 0.79
COL4A2P08572 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.96■□□□□ 0.79
COL4A2P08572 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.96■□□□□ 0.79
COL4A2P08572 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A2P08572 AC139887.4-201ENST00000607877 719 ntBASIC19.96■□□□□ 0.79
COL4A2P08572 BX119927.1-201ENST00000636596 1552 ntBASIC19.95■□□□□ 0.78
COL4A2P08572 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A2P08572 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A2P08572 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.95■□□□□ 0.78
COL4A2P08572 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A2P08572 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.95■□□□□ 0.78
COL4A2P08572 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A2P08572 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.95■□□□□ 0.78
COL4A2P08572 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.95■□□□□ 0.78
COL4A2P08572 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.95■□□□□ 0.78
COL4A2P08572 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.95■□□□□ 0.78
COL4A2P08572 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.95■□□□□ 0.78
COL4A2P08572 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
COL4A2P08572 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.95■□□□□ 0.78
COL4A2P08572 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A2P08572 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A2P08572 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A2P08572 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A2P08572 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A2P08572 AC092720.2-201ENST00000602388 1665 ntBASIC19.94■□□□□ 0.78
COL4A2P08572 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.94■□□□□ 0.78
COL4A2P08572 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms