Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC01006-201ENST00000333319 2292 ntBASIC19.91■□□□□ 0.78
RETP07949 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RETP07949 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETP07949 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETP07949 FEM1AP1-201ENST00000431297 1995 ntBASIC19.9■□□□□ 0.78
RETP07949 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETP07949 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETP07949 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RETP07949 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RETP07949 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
RETP07949 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.9■□□□□ 0.78
RETP07949 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.9■□□□□ 0.78
RETP07949 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
RETP07949 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.9■□□□□ 0.78
RETP07949 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RETP07949 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.9■□□□□ 0.78
RETP07949 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.9■□□□□ 0.78
RETP07949 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETP07949 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RETP07949 KRT16P1-201ENST00000399124 1418 ntBASIC19.9■□□□□ 0.78
RETP07949 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RETP07949 AC124283.5-201ENST00000624661 1809 ntBASIC19.9■□□□□ 0.78
RETP07949 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RETP07949 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RETP07949 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETP07949 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETP07949 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETP07949 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.89■□□□□ 0.77
RETP07949 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.89■□□□□ 0.77
RETP07949 NIFKP9-201ENST00000419265 221 ntBASIC19.89■□□□□ 0.77
RETP07949 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.89■□□□□ 0.77
RETP07949 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RETP07949 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.89■□□□□ 0.77
RETP07949 KRT18P56-201ENST00000507275 550 ntBASIC19.89■□□□□ 0.77
RETP07949 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.89■□□□□ 0.77
RETP07949 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.89■□□□□ 0.77
RETP07949 AC027702.1-201ENST00000563810 1770 ntBASIC19.89■□□□□ 0.77
RETP07949 C2orf69P3-201ENST00000565542 1120 ntBASIC19.89■□□□□ 0.77
RETP07949 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.89■□□□□ 0.77
RETP07949 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RETP07949 AL121894.2-201ENST00000602977 491 ntBASIC19.89■□□□□ 0.77
RETP07949 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.89■□□□□ 0.77
RETP07949 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RETP07949 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RETP07949 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RETP07949 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETP07949 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETP07949 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.88■□□□□ 0.77
RETP07949 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETP07949 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETP07949 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.88■□□□□ 0.77
RETP07949 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETP07949 AK4P3-201ENST00000418260 669 ntBASIC19.88■□□□□ 0.77
RETP07949 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.88■□□□□ 0.77
RETP07949 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.88■□□□□ 0.77
RETP07949 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.88■□□□□ 0.77
RETP07949 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETP07949 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.88■□□□□ 0.77
RETP07949 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETP07949 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETP07949 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETP07949 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RETP07949 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
RETP07949 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.87■□□□□ 0.77
RETP07949 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RETP07949 BX664615.1-201ENST00000443558 458 ntBASIC19.87■□□□□ 0.77
RETP07949 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.87■□□□□ 0.77
RETP07949 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.87■□□□□ 0.77
RETP07949 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.87■□□□□ 0.77
RETP07949 AC022616.7-201ENST00000525383 220 ntBASIC19.87■□□□□ 0.77
RETP07949 EGLN1P1-201ENST00000531623 762 ntBASIC19.87■□□□□ 0.77
RETP07949 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.87■□□□□ 0.77
RETP07949 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
RETP07949 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RETP07949 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.87■□□□□ 0.77
RETP07949 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RETP07949 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RETP07949 AL121603.2-201ENST00000557373 2117 ntBASIC19.87■□□□□ 0.77
RETP07949 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RETP07949 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.86■□□□□ 0.77
RETP07949 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.86■□□□□ 0.77
RETP07949 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.86■□□□□ 0.77
RETP07949 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RETP07949 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms