Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.07■■□□□ 1.12
TPM3P06753 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.07■■□□□ 1.12
TPM3P06753 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.07■■□□□ 1.12
TPM3P06753 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.07■■□□□ 1.12
TPM3P06753 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.07■■□□□ 1.12
TPM3P06753 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.07■■□□□ 1.12
TPM3P06753 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.07■■□□□ 1.12
TPM3P06753 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.07■■□□□ 1.12
TPM3P06753 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.07■■□□□ 1.12
TPM3P06753 AL031432.3-201ENST00000607698 485 ntBASIC22.07■■□□□ 1.12
TPM3P06753 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.07■■□□□ 1.12
TPM3P06753 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.07■■□□□ 1.12
TPM3P06753 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.07■■□□□ 1.12
TPM3P06753 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
TPM3P06753 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
TPM3P06753 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
TPM3P06753 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.07■■□□□ 1.12
TPM3P06753 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
TPM3P06753 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.06■■□□□ 1.12
TPM3P06753 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.06■■□□□ 1.12
TPM3P06753 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.06■■□□□ 1.12
TPM3P06753 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.06■■□□□ 1.12
TPM3P06753 CDV3P1-201ENST00000471403 739 ntBASIC22.06■■□□□ 1.12
TPM3P06753 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.06■■□□□ 1.12
TPM3P06753 AC110285.6-201ENST00000617652 491 ntBASIC22.06■■□□□ 1.12
TPM3P06753 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
TPM3P06753 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.06■■□□□ 1.12
TPM3P06753 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
TPM3P06753 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.06■■□□□ 1.12
TPM3P06753 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TPM3P06753 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.06■■□□□ 1.12
TPM3P06753 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TPM3P06753 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 AC097381.1-201ENST00000429019 1296 ntBASIC22.05■■□□□ 1.12
TPM3P06753 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.05■■□□□ 1.12
TPM3P06753 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.05■■□□□ 1.12
TPM3P06753 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.05■■□□□ 1.12
TPM3P06753 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 RBM17P2-201ENST00000616397 1405 ntBASIC22.05■■□□□ 1.12
TPM3P06753 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TPM3P06753 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TPM3P06753 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.04■■□□□ 1.12
TPM3P06753 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
TPM3P06753 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TPM3P06753 LINC02228-203ENST00000641970 1355 ntBASIC22.04■■□□□ 1.12
TPM3P06753 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TPM3P06753 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.04■■□□□ 1.12
TPM3P06753 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.04■■□□□ 1.12
TPM3P06753 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.04■■□□□ 1.12
TPM3P06753 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.04■■□□□ 1.12
TPM3P06753 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TPM3P06753 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
TPM3P06753 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TPM3P06753 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.04■■□□□ 1.12
TPM3P06753 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TPM3P06753 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TPM3P06753 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TPM3P06753 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
TPM3P06753 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TPM3P06753 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
TPM3P06753 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TPM3P06753 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.04■■□□□ 1.12
TPM3P06753 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC22.03■■□□□ 1.12
TPM3P06753 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms