Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 AL512408.1-201ENST00000569378 2000 ntBASIC18.03■□□□□ 0.48
P04436 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
P04436 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
P04436 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
P04436 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
P04436 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
P04436 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.02■□□□□ 0.48
P04436 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
P04436 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
P04436 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.02■□□□□ 0.48
P04436 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
P04436 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
P04436 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
P04436 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
P04436 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
P04436 AP002982.1-201ENST00000492365 877 ntBASIC18.02■□□□□ 0.48
P04436 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.02■□□□□ 0.48
P04436 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.02■□□□□ 0.48
P04436 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
P04436 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.02■□□□□ 0.48
P04436 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.02■□□□□ 0.48
P04436 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
P04436 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
P04436 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
P04436 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.01■□□□□ 0.47
P04436 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
P04436 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
P04436 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 AF186192.3-201ENST00000583427 947 ntBASIC18.01■□□□□ 0.47
P04436 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.01■□□□□ 0.47
P04436 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.01■□□□□ 0.47
P04436 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
P04436 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.01■□□□□ 0.47
P04436 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
P04436 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
P04436 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
P04436 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.01■□□□□ 0.47
P04436 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.01■□□□□ 0.47
P04436 KRT17P2-201ENST00000300992 1314 ntBASIC18■□□□□ 0.47
P04436 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P04436 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
P04436 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P04436 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18■□□□□ 0.47
P04436 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P04436 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18■□□□□ 0.47
P04436 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P04436 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18■□□□□ 0.47
P04436 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18■□□□□ 0.47
P04436 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18■□□□□ 0.47
P04436 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18■□□□□ 0.47
P04436 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18■□□□□ 0.47
P04436 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18■□□□□ 0.47
P04436 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P04436 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18■□□□□ 0.47
P04436 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18■□□□□ 0.47
P04436 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
P04436 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
P04436 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P04436 AP001271.2-201ENST00000624018 1556 ntBASIC18■□□□□ 0.47
P04436 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.99■□□□□ 0.47
P04436 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.99■□□□□ 0.47
P04436 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
P04436 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P04436 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P04436 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.99■□□□□ 0.47
P04436 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
P04436 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P04436 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P04436 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P04436 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.99■□□□□ 0.47
P04436 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
P04436 TUBB8P6-201ENST00000436895 1288 ntBASIC17.99■□□□□ 0.47
P04436 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
P04436 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.99■□□□□ 0.47
P04436 MIR4785-201ENST00000585005 73 ntBASIC17.99■□□□□ 0.47
P04436 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.99■□□□□ 0.47
P04436 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.99■□□□□ 0.47
P04436 AC113410.3-201ENST00000623366 203 ntBASIC17.99■□□□□ 0.47
P04436 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.99■□□□□ 0.47
P04436 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P04436 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
P04436 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P04436 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P04436 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P04436 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
P04436 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms