Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.57■□□□□ 0.24
CD74P04233 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CD74P04233 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
CD74P04233 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.57■□□□□ 0.24
CD74P04233 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.57■□□□□ 0.24
CD74P04233 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.57■□□□□ 0.24
CD74P04233 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.57■□□□□ 0.24
CD74P04233 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.57■□□□□ 0.24
CD74P04233 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.57■□□□□ 0.24
CD74P04233 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.57■□□□□ 0.24
CD74P04233 SLC7A5P1-201ENST00000568957 537 ntBASIC16.57■□□□□ 0.24
CD74P04233 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CD74P04233 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.57■□□□□ 0.24
CD74P04233 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.57■□□□□ 0.24
CD74P04233 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CD74P04233 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.57■□□□□ 0.24
CD74P04233 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.56■□□□□ 0.24
CD74P04233 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 AC104581.1-202ENST00000635932 2618 ntBASIC16.56■□□□□ 0.24
CD74P04233 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.56■□□□□ 0.24
CD74P04233 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.56■□□□□ 0.24
CD74P04233 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.56■□□□□ 0.24
CD74P04233 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.56■□□□□ 0.24
CD74P04233 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 AC104187.1-201ENST00000607510 612 ntBASIC16.56■□□□□ 0.24
CD74P04233 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD74P04233 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.56■□□□□ 0.24
CD74P04233 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.56■□□□□ 0.24
CD74P04233 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CD74P04233 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CD74P04233 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.55■□□□□ 0.24
CD74P04233 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CD74P04233 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.55■□□□□ 0.24
CD74P04233 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.55■□□□□ 0.24
CD74P04233 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 EDA-201ENST00000338901 1233 ntBASIC16.55■□□□□ 0.24
CD74P04233 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CD74P04233 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.55■□□□□ 0.24
CD74P04233 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.55■□□□□ 0.24
CD74P04233 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.55■□□□□ 0.24
CD74P04233 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.55■□□□□ 0.24
CD74P04233 AL031963.3-201ENST00000606441 850 ntBASIC16.55■□□□□ 0.24
CD74P04233 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CD74P04233 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.55■□□□□ 0.24
CD74P04233 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD74P04233 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CD74P04233 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CD74P04233 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.54■□□□□ 0.24
CD74P04233 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.54■□□□□ 0.24
CD74P04233 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.54■□□□□ 0.24
CD74P04233 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.54■□□□□ 0.24
CD74P04233 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CD74P04233 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CD74P04233 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CD74P04233 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 MIR939-201ENST00000401314 82 ntBASIC16.54■□□□□ 0.24
CD74P04233 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.54■□□□□ 0.24
CD74P04233 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.54■□□□□ 0.24
CD74P04233 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms