Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT6AP02538 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT6AP02538 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT6AP02538 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT6AP02538 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT6AP02538 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT6AP02538 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT6AP02538 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT6AP02538 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT6AP02538 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT6AP02538 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT6AP02538 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT6AP02538 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT6AP02538 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT6AP02538 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
KRT6AP02538 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
KRT6AP02538 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
KRT6AP02538 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.07■□□□□ 0.64
KRT6AP02538 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT6AP02538 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT6AP02538 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT6AP02538 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT6AP02538 MIR663A-201ENST00000385250 93 ntBASIC19.07■□□□□ 0.64
KRT6AP02538 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.07■□□□□ 0.64
KRT6AP02538 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.07■□□□□ 0.64
KRT6AP02538 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT6AP02538 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT6AP02538 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT6AP02538 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT6AP02538 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT6AP02538 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
KRT6AP02538 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT6AP02538 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT6AP02538 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KRT6AP02538 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT6AP02538 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT6AP02538 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT6AP02538 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT6AP02538 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KRT6AP02538 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT6AP02538 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT6AP02538 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT6AP02538 GPX1P1-201ENST00000388829 606 ntBASIC19.06■□□□□ 0.64
KRT6AP02538 BX276092.2-201ENST00000417668 665 ntBASIC19.06■□□□□ 0.64
KRT6AP02538 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.06■□□□□ 0.64
KRT6AP02538 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.06■□□□□ 0.64
KRT6AP02538 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.06■□□□□ 0.64
KRT6AP02538 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT6AP02538 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KRT6AP02538 AL050303.2-201ENST00000619798 666 ntBASIC19.06■□□□□ 0.64
KRT6AP02538 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT6AP02538 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT6AP02538 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT6AP02538 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT6AP02538 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT6AP02538 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT6AP02538 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
KRT6AP02538 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT6AP02538 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT6AP02538 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT6AP02538 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT6AP02538 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
KRT6AP02538 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT6AP02538 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KRT6AP02538 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KRT6AP02538 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT6AP02538 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.05■□□□□ 0.64
KRT6AP02538 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
KRT6AP02538 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT6AP02538 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT6AP02538 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
KRT6AP02538 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT6AP02538 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT6AP02538 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT6AP02538 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT6AP02538 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT6AP02538 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
KRT6AP02538 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
KRT6AP02538 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
KRT6AP02538 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
KRT6AP02538 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms