Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
HLA-DRAP01903 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HLA-DRAP01903 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DRAP01903 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DRAP01903 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DRAP01903 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DRAP01903 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.23■□□□□ 0.99
HLA-DRAP01903 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DRAP01903 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DRAP01903 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DRAP01903 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
HLA-DRAP01903 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DRAP01903 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DRAP01903 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DRAP01903 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.22■□□□□ 0.99
HLA-DRAP01903 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
HLA-DRAP01903 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.22■□□□□ 0.99
HLA-DRAP01903 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.22■□□□□ 0.99
HLA-DRAP01903 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 AC073648.6-201ENST00000641589 218 ntBASIC21.22■□□□□ 0.99
HLA-DRAP01903 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
HLA-DRAP01903 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DRAP01903 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 MTDHP1-201ENST00000605323 784 ntBASIC21.21■□□□□ 0.99
HLA-DRAP01903 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-DRAP01903 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DRAP01903 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
HLA-DRAP01903 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 AC128676.1-201ENST00000454392 318 ntBASIC21.2■□□□□ 0.98
HLA-DRAP01903 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HLA-DRAP01903 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DRAP01903 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DRAP01903 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DRAP01903 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DRAP01903 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HLA-DRAP01903 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DRAP01903 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DRAP01903 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HLA-DRAP01903 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DRAP01903 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DRAP01903 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DRAP01903 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HLA-DRAP01903 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DRAP01903 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HLA-DRAP01903 FAM201B-201ENST00000458407 597 ntBASIC21.19■□□□□ 0.98
HLA-DRAP01903 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms