Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFNB1P01574 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
IFNB1P01574 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IFNB1P01574 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IFNB1P01574 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.37■□□□□ 0.85
IFNB1P01574 C2orf69P4-201ENST00000565394 541 ntBASIC20.37■□□□□ 0.85
IFNB1P01574 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.37■□□□□ 0.85
IFNB1P01574 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IFNB1P01574 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.37■□□□□ 0.85
IFNB1P01574 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IFNB1P01574 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
IFNB1P01574 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.37■□□□□ 0.85
IFNB1P01574 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
IFNB1P01574 AC018445.3-201ENST00000624177 1945 ntBASIC20.37■□□□□ 0.85
IFNB1P01574 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.37■□□□□ 0.85
IFNB1P01574 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
IFNB1P01574 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
IFNB1P01574 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
IFNB1P01574 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 AC098818.2-201ENST00000564925 2320 ntBASIC20.36■□□□□ 0.85
IFNB1P01574 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.36■□□□□ 0.85
IFNB1P01574 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
IFNB1P01574 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.36■□□□□ 0.85
IFNB1P01574 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.36■□□□□ 0.85
IFNB1P01574 AC004911.1-201ENST00000416316 871 ntBASIC20.36■□□□□ 0.85
IFNB1P01574 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.36■□□□□ 0.85
IFNB1P01574 AC005181.1-201ENST00000604782 1256 ntBASIC20.36■□□□□ 0.85
IFNB1P01574 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 AP001271.2-201ENST00000624018 1556 ntBASIC20.36■□□□□ 0.85
IFNB1P01574 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
IFNB1P01574 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.36■□□□□ 0.85
IFNB1P01574 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFNB1P01574 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
IFNB1P01574 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFNB1P01574 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IFNB1P01574 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
IFNB1P01574 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.35■□□□□ 0.85
IFNB1P01574 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
IFNB1P01574 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
IFNB1P01574 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFNB1P01574 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFNB1P01574 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
IFNB1P01574 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
IFNB1P01574 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.35■□□□□ 0.85
IFNB1P01574 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
IFNB1P01574 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
IFNB1P01574 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IFNB1P01574 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFNB1P01574 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFNB1P01574 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFNB1P01574 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFNB1P01574 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.35■□□□□ 0.85
IFNB1P01574 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFNB1P01574 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.34■□□□□ 0.85
IFNB1P01574 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.34■□□□□ 0.85
IFNB1P01574 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.34■□□□□ 0.85
IFNB1P01574 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
IFNB1P01574 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.34■□□□□ 0.85
IFNB1P01574 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.34■□□□□ 0.85
IFNB1P01574 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.34■□□□□ 0.85
IFNB1P01574 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.34■□□□□ 0.85
IFNB1P01574 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.34■□□□□ 0.85
IFNB1P01574 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
IFNB1P01574 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
IFNB1P01574 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 PHGDH-210ENST00000641115 1638 ntBASIC20.34■□□□□ 0.85
IFNB1P01574 AP000974.1-201ENST00000623909 2387 ntBASIC20.34■□□□□ 0.85
IFNB1P01574 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IFNB1P01574 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
IFNB1P01574 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
IFNB1P01574 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
IFNB1P01574 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.33■□□□□ 0.85
IFNB1P01574 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
IFNB1P01574 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
IFNB1P01574 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IFNB1P01574 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IFNB1P01574 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms