Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-CO1P00395 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MT-CO1P00395 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.2■□□□□ 0.82
MT-CO1P00395 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MT-CO1P00395 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.2■□□□□ 0.82
MT-CO1P00395 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
MT-CO1P00395 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.2■□□□□ 0.82
MT-CO1P00395 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.2■□□□□ 0.82
MT-CO1P00395 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.2■□□□□ 0.82
MT-CO1P00395 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.2■□□□□ 0.82
MT-CO1P00395 AP006294.2-201ENST00000641667 209 ntBASIC20.2■□□□□ 0.82
MT-CO1P00395 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-CO1P00395 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-CO1P00395 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MT-CO1P00395 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-CO1P00395 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-CO1P00395 BX119927.1-201ENST00000636596 1552 ntBASIC20.2■□□□□ 0.82
MT-CO1P00395 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-CO1P00395 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MT-CO1P00395 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
MT-CO1P00395 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MT-CO1P00395 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.19■□□□□ 0.82
MT-CO1P00395 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.19■□□□□ 0.82
MT-CO1P00395 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-CO1P00395 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-CO1P00395 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-CO1P00395 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-CO1P00395 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-CO1P00395 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MT-CO1P00395 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
MT-CO1P00395 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.19■□□□□ 0.82
MT-CO1P00395 PRKY-204ENST00000533551 1019 ntBASIC20.19■□□□□ 0.82
MT-CO1P00395 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MT-CO1P00395 AC110285.5-201ENST00000611501 352 ntBASIC20.19■□□□□ 0.82
MT-CO1P00395 AL121906.2-201ENST00000621597 723 ntBASIC20.19■□□□□ 0.82
MT-CO1P00395 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.19■□□□□ 0.82
MT-CO1P00395 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
MT-CO1P00395 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-CO1P00395 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.19■□□□□ 0.82
MT-CO1P00395 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MT-CO1P00395 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-CO1P00395 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MT-CO1P00395 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.18■□□□□ 0.82
MT-CO1P00395 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.18■□□□□ 0.82
MT-CO1P00395 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.18■□□□□ 0.82
MT-CO1P00395 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.18■□□□□ 0.82
MT-CO1P00395 AC008550.1-201ENST00000511500 884 ntBASIC20.18■□□□□ 0.82
MT-CO1P00395 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.18■□□□□ 0.82
MT-CO1P00395 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.18■□□□□ 0.82
MT-CO1P00395 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
MT-CO1P00395 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
MT-CO1P00395 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MT-CO1P00395 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MT-CO1P00395 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-CO1P00395 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.18■□□□□ 0.82
MT-CO1P00395 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MT-CO1P00395 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MT-CO1P00395 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.17■□□□□ 0.82
MT-CO1P00395 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MT-CO1P00395 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MT-CO1P00395 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
MT-CO1P00395 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MT-CO1P00395 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.17■□□□□ 0.82
MT-CO1P00395 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.17■□□□□ 0.82
MT-CO1P00395 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.17■□□□□ 0.82
MT-CO1P00395 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.17■□□□□ 0.82
MT-CO1P00395 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.17■□□□□ 0.82
MT-CO1P00395 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.17■□□□□ 0.82
MT-CO1P00395 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MT-CO1P00395 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MT-CO1P00395 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
MT-CO1P00395 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MT-CO1P00395 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
MT-CO1P00395 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
MT-CO1P00395 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.17■□□□□ 0.82
MT-CO1P00395 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.17■□□□□ 0.82
MT-CO1P00395 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.17■□□□□ 0.82
MT-CO1P00395 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MT-CO1P00395 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.16■□□□□ 0.82
MT-CO1P00395 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MT-CO1P00395 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms