Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CLPTM1O96005 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLPTM1O96005 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLPTM1O96005 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.55■□□□□ 0.56
CLPTM1O96005 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CLPTM1O96005 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 AP006587.3-201ENST00000525742 1516 ntBASIC18.55■□□□□ 0.56
CLPTM1O96005 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.55■□□□□ 0.56
CLPTM1O96005 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.55■□□□□ 0.56
CLPTM1O96005 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.55■□□□□ 0.56
CLPTM1O96005 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.55■□□□□ 0.56
CLPTM1O96005 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLPTM1O96005 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.55■□□□□ 0.56
CLPTM1O96005 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLPTM1O96005 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLPTM1O96005 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLPTM1O96005 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.54■□□□□ 0.56
CLPTM1O96005 AL691432.2-201ENST00000607222 2038 ntBASIC18.54■□□□□ 0.56
CLPTM1O96005 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLPTM1O96005 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CLPTM1O96005 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.54■□□□□ 0.56
CLPTM1O96005 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.54■□□□□ 0.56
CLPTM1O96005 AC027612.3-201ENST00000413684 1047 ntBASIC18.54■□□□□ 0.56
CLPTM1O96005 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.54■□□□□ 0.56
CLPTM1O96005 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CLPTM1O96005 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLPTM1O96005 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLPTM1O96005 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLPTM1O96005 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CLPTM1O96005 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.54■□□□□ 0.56
CLPTM1O96005 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPTM1O96005 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.53■□□□□ 0.56
CLPTM1O96005 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLPTM1O96005 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
CLPTM1O96005 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLPTM1O96005 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLPTM1O96005 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CLPTM1O96005 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPTM1O96005 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPTM1O96005 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPTM1O96005 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.53■□□□□ 0.56
CLPTM1O96005 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPTM1O96005 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLPTM1O96005 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPTM1O96005 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLPTM1O96005 AC097381.1-201ENST00000429019 1296 ntBASIC18.53■□□□□ 0.56
CLPTM1O96005 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.53■□□□□ 0.56
CLPTM1O96005 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.53■□□□□ 0.56
CLPTM1O96005 AC087623.3-201ENST00000607047 1098 ntBASIC18.53■□□□□ 0.56
CLPTM1O96005 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLPTM1O96005 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.53■□□□□ 0.56
CLPTM1O96005 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPTM1O96005 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPTM1O96005 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.53■□□□□ 0.56
CLPTM1O96005 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.53■□□□□ 0.56
CLPTM1O96005 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CLPTM1O96005 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.53■□□□□ 0.56
CLPTM1O96005 CROCCP3-202ENST00000420820 1947 ntBASIC18.53■□□□□ 0.56
CLPTM1O96005 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPTM1O96005 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.53■□□□□ 0.56
CLPTM1O96005 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLPTM1O96005 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.52■□□□□ 0.56
CLPTM1O96005 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.52■□□□□ 0.56
CLPTM1O96005 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLPTM1O96005 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.52■□□□□ 0.56
CLPTM1O96005 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.52■□□□□ 0.56
CLPTM1O96005 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.52■□□□□ 0.56
CLPTM1O96005 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLPTM1O96005 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLPTM1O96005 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.52■□□□□ 0.56
CLPTM1O96005 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLPTM1O96005 YBX1P1-201ENST00000445822 960 ntBASIC18.52■□□□□ 0.56
CLPTM1O96005 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.52■□□□□ 0.56
CLPTM1O96005 MIR6821-201ENST00000617625 74 ntBASIC18.52■□□□□ 0.56
CLPTM1O96005 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms