Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.18■□□□□ 0.82
TOP3BO95985 ARMC10P1-201ENST00000313754 855 ntBASIC20.18■□□□□ 0.82
TOP3BO95985 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TOP3BO95985 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TOP3BO95985 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.18■□□□□ 0.82
TOP3BO95985 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.18■□□□□ 0.82
TOP3BO95985 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.18■□□□□ 0.82
TOP3BO95985 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.18■□□□□ 0.82
TOP3BO95985 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TOP3BO95985 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOP3BO95985 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TOP3BO95985 AC116562.4-201ENST00000641316 2276 ntBASIC20.18■□□□□ 0.82
TOP3BO95985 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TOP3BO95985 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP3BO95985 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP3BO95985 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP3BO95985 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TOP3BO95985 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
TOP3BO95985 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.17■□□□□ 0.82
TOP3BO95985 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP3BO95985 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TOP3BO95985 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP3BO95985 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.17■□□□□ 0.82
TOP3BO95985 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TOP3BO95985 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.17■□□□□ 0.82
TOP3BO95985 RPS2P55-201ENST00000397318 883 ntBASIC20.17■□□□□ 0.82
TOP3BO95985 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP3BO95985 AC107956.1-201ENST00000494359 873 ntBASIC20.17■□□□□ 0.82
TOP3BO95985 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TOP3BO95985 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TOP3BO95985 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.17■□□□□ 0.82
TOP3BO95985 AC233702.5-201ENST00000584107 538 ntBASIC20.17■□□□□ 0.82
TOP3BO95985 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOP3BO95985 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.17■□□□□ 0.82
TOP3BO95985 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.17■□□□□ 0.82
TOP3BO95985 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP3BO95985 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOP3BO95985 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
TOP3BO95985 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TOP3BO95985 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.16■□□□□ 0.82
TOP3BO95985 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.16■□□□□ 0.82
TOP3BO95985 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOP3BO95985 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.16■□□□□ 0.82
TOP3BO95985 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.16■□□□□ 0.82
TOP3BO95985 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.16■□□□□ 0.82
TOP3BO95985 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.16■□□□□ 0.82
TOP3BO95985 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.16■□□□□ 0.82
TOP3BO95985 AC012306.2-201ENST00000609350 630 ntBASIC20.16■□□□□ 0.82
TOP3BO95985 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOP3BO95985 KRT17P2-201ENST00000300992 1314 ntBASIC20.16■□□□□ 0.82
TOP3BO95985 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.16■□□□□ 0.82
TOP3BO95985 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.16■□□□□ 0.82
TOP3BO95985 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOP3BO95985 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TOP3BO95985 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.16■□□□□ 0.82
TOP3BO95985 AC092368.3-202ENST00000574180 1591 ntBASIC20.16■□□□□ 0.82
TOP3BO95985 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TOP3BO95985 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TOP3BO95985 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TOP3BO95985 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.15■□□□□ 0.82
TOP3BO95985 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.15■□□□□ 0.82
TOP3BO95985 C2orf69P4-201ENST00000565394 541 ntBASIC20.15■□□□□ 0.82
TOP3BO95985 SOX15-203ENST00000570788 1093 ntBASIC20.15■□□□□ 0.82
TOP3BO95985 AC097493.4-201ENST00000641197 219 ntBASIC20.15■□□□□ 0.82
TOP3BO95985 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TOP3BO95985 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.15■□□□□ 0.82
TOP3BO95985 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.15■□□□□ 0.82
TOP3BO95985 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TOP3BO95985 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
TOP3BO95985 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOP3BO95985 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOP3BO95985 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.14■□□□□ 0.81
TOP3BO95985 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TOP3BO95985 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOP3BO95985 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
TOP3BO95985 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TOP3BO95985 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TOP3BO95985 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.14■□□□□ 0.81
TOP3BO95985 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms