Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC30.88■■■□□ 2.53
PCF11O94913 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
PCF11O94913 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PCF11O94913 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC30.88■■■□□ 2.53
PCF11O94913 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
PCF11O94913 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
PCF11O94913 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PCF11O94913 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
PCF11O94913 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCF11O94913 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC30.87■■■□□ 2.53
PCF11O94913 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC30.87■■■□□ 2.53
PCF11O94913 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCF11O94913 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC30.87■■■□□ 2.53
PCF11O94913 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC30.87■■■□□ 2.53
PCF11O94913 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCF11O94913 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC30.87■■■□□ 2.53
PCF11O94913 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PCF11O94913 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCF11O94913 PALM-208ENST00000592155 2272 ntTSL 4 BASIC30.86■■■□□ 2.53
PCF11O94913 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC30.86■■■□□ 2.53
PCF11O94913 AC073508.3-201ENST00000619697 1419 ntBASIC30.86■■■□□ 2.53
PCF11O94913 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
PCF11O94913 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PCF11O94913 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PCF11O94913 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
PCF11O94913 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC30.86■■■□□ 2.53
PCF11O94913 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC30.86■■■□□ 2.53
PCF11O94913 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC30.86■■■□□ 2.53
PCF11O94913 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC30.86■■■□□ 2.53
PCF11O94913 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
PCF11O94913 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
PCF11O94913 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC30.86■■■□□ 2.53
PCF11O94913 AC020907.5-201ENST00000624372 1936 ntBASIC30.86■■■□□ 2.53
PCF11O94913 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
PCF11O94913 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCF11O94913 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PCF11O94913 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC30.85■■■□□ 2.53
PCF11O94913 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCF11O94913 AP001271.2-201ENST00000624018 1556 ntBASIC30.85■■■□□ 2.53
PCF11O94913 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCF11O94913 PTPA-216ENST00000432651 857 ntTSL 2 BASIC30.85■■■□□ 2.53
PCF11O94913 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC30.85■■■□□ 2.53
PCF11O94913 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCF11O94913 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCF11O94913 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCF11O94913 FEM1AP1-201ENST00000431297 1995 ntBASIC30.85■■■□□ 2.53
PCF11O94913 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PCF11O94913 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCF11O94913 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCF11O94913 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC30.85■■■□□ 2.53
PCF11O94913 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC30.85■■■□□ 2.53
PCF11O94913 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC30.85■■■□□ 2.53
PCF11O94913 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PCF11O94913 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PCF11O94913 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC30.84■■■□□ 2.53
PCF11O94913 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.84■■■□□ 2.53
PCF11O94913 FDX2-206ENST00000492239 773 ntTSL 2 BASIC30.84■■■□□ 2.53
PCF11O94913 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
PCF11O94913 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC30.84■■■□□ 2.53
PCF11O94913 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC30.84■■■□□ 2.53
PCF11O94913 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PCF11O94913 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PCF11O94913 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PCF11O94913 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
PCF11O94913 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCF11O94913 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCF11O94913 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCF11O94913 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCF11O94913 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
PCF11O94913 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC30.83■■■□□ 2.53
PCF11O94913 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCF11O94913 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC30.83■■■□□ 2.53
PCF11O94913 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
PCF11O94913 AC096733.2-201ENST00000609937 1394 ntBASIC30.83■■■□□ 2.53
PCF11O94913 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCF11O94913 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PCF11O94913 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCF11O94913 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC30.83■■■□□ 2.53
PCF11O94913 DET1-207ENST00000564406 2315 ntTSL 2 BASIC30.83■■■□□ 2.53
PCF11O94913 C2orf69P3-201ENST00000565542 1120 ntBASIC30.83■■■□□ 2.53
PCF11O94913 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC30.83■■■□□ 2.53
PCF11O94913 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCF11O94913 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC30.82■■■□□ 2.52
PCF11O94913 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC30.82■■■□□ 2.52
PCF11O94913 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC30.82■■■□□ 2.52
PCF11O94913 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCF11O94913 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC30.82■■■□□ 2.52
PCF11O94913 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCF11O94913 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
PCF11O94913 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC30.82■■■□□ 2.52
PCF11O94913 AC010203.1-204ENST00000548782 407 ntBASIC30.82■■■□□ 2.52
PCF11O94913 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC30.82■■■□□ 2.52
PCF11O94913 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
PCF11O94913 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC30.82■■■□□ 2.52
PCF11O94913 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCF11O94913 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCF11O94913 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
PCF11O94913 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
PCF11O94913 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCF11O94913 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms