Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.86■□□□□ 0.45
CLPXO76031 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLPXO76031 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.86■□□□□ 0.45
CLPXO76031 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.86■□□□□ 0.45
CLPXO76031 AC068880.1-201ENST00000507289 2297 ntBASIC17.86■□□□□ 0.45
CLPXO76031 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CLPXO76031 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CLPXO76031 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CLPXO76031 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.85■□□□□ 0.45
CLPXO76031 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.85■□□□□ 0.45
CLPXO76031 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLPXO76031 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CLPXO76031 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.85■□□□□ 0.45
CLPXO76031 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.85■□□□□ 0.45
CLPXO76031 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CLPXO76031 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLPXO76031 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.84■□□□□ 0.45
CLPXO76031 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.84■□□□□ 0.45
CLPXO76031 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.84■□□□□ 0.45
CLPXO76031 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
CLPXO76031 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.84■□□□□ 0.45
CLPXO76031 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.84■□□□□ 0.45
CLPXO76031 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLPXO76031 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.84■□□□□ 0.45
CLPXO76031 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CLPXO76031 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLPXO76031 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CLPXO76031 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLPXO76031 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CLPXO76031 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CLPXO76031 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CLPXO76031 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLPXO76031 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLPXO76031 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLPXO76031 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.83■□□□□ 0.45
CLPXO76031 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.83■□□□□ 0.45
CLPXO76031 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLPXO76031 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CLPXO76031 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLPXO76031 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CLPXO76031 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLPXO76031 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLPXO76031 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.83■□□□□ 0.44
CLPXO76031 AC087623.3-201ENST00000607047 1098 ntBASIC17.83■□□□□ 0.44
CLPXO76031 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLPXO76031 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLPXO76031 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLPXO76031 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLPXO76031 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLPXO76031 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLPXO76031 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CLPXO76031 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLPXO76031 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLPXO76031 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.82■□□□□ 0.44
CLPXO76031 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.82■□□□□ 0.44
CLPXO76031 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.82■□□□□ 0.44
CLPXO76031 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.82■□□□□ 0.44
CLPXO76031 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.82■□□□□ 0.44
CLPXO76031 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms