Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNKO75909 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNKO75909 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CCNKO75909 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCNKO75909 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CCNKO75909 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNKO75909 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNKO75909 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.08■□□□□ 0.32
CCNKO75909 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCNKO75909 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCNKO75909 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCNKO75909 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
CCNKO75909 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCNKO75909 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.08■□□□□ 0.32
CCNKO75909 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCNKO75909 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCNKO75909 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 MKRN4P-201ENST00000444706 1521 ntBASIC17.07■□□□□ 0.32
CCNKO75909 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.07■□□□□ 0.32
CCNKO75909 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCNKO75909 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 AC021242.3-201ENST00000607598 1377 ntBASIC17.07■□□□□ 0.32
CCNKO75909 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.07■□□□□ 0.32
CCNKO75909 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.07■□□□□ 0.32
CCNKO75909 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.07■□□□□ 0.32
CCNKO75909 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.07■□□□□ 0.32
CCNKO75909 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCNKO75909 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNKO75909 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.07■□□□□ 0.32
CCNKO75909 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.07■□□□□ 0.32
CCNKO75909 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCNKO75909 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNKO75909 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNKO75909 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCNKO75909 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNKO75909 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNKO75909 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNKO75909 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNKO75909 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCNKO75909 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNKO75909 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNKO75909 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CCNKO75909 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNKO75909 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.05■□□□□ 0.32
CCNKO75909 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNKO75909 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 AC011484.1-201ENST00000377652 1995 ntBASIC17.05■□□□□ 0.32
CCNKO75909 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNKO75909 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNKO75909 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.05■□□□□ 0.32
CCNKO75909 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
CCNKO75909 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNKO75909 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCNKO75909 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCNKO75909 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCNKO75909 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCNKO75909 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCNKO75909 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCNKO75909 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms