Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.28■□□□□ 0.84
RPP40O75818 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.28■□□□□ 0.84
RPP40O75818 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.28■□□□□ 0.84
RPP40O75818 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.28■□□□□ 0.84
RPP40O75818 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.28■□□□□ 0.84
RPP40O75818 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RPP40O75818 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RPP40O75818 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPP40O75818 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.28■□□□□ 0.84
RPP40O75818 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.27■□□□□ 0.84
RPP40O75818 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPP40O75818 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPP40O75818 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPP40O75818 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.27■□□□□ 0.84
RPP40O75818 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.27■□□□□ 0.84
RPP40O75818 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPP40O75818 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPP40O75818 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPP40O75818 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
RPP40O75818 KRT16P5-201ENST00000455284 522 ntBASIC20.27■□□□□ 0.84
RPP40O75818 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.27■□□□□ 0.84
RPP40O75818 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.27■□□□□ 0.84
RPP40O75818 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.27■□□□□ 0.84
RPP40O75818 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPP40O75818 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
RPP40O75818 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPP40O75818 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RPP40O75818 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.27■□□□□ 0.84
RPP40O75818 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RPP40O75818 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
RPP40O75818 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.27■□□□□ 0.83
RPP40O75818 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPP40O75818 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RPP40O75818 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPP40O75818 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
RPP40O75818 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPP40O75818 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPP40O75818 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPP40O75818 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RPP40O75818 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RPP40O75818 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPP40O75818 FAM197Y1-201ENST00000421178 764 ntBASIC20.26■□□□□ 0.83
RPP40O75818 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.26■□□□□ 0.83
RPP40O75818 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.26■□□□□ 0.83
RPP40O75818 MIR6786-201ENST00000616843 113 ntBASIC20.26■□□□□ 0.83
RPP40O75818 AC005363.2-201ENST00000618631 242 ntBASIC20.26■□□□□ 0.83
RPP40O75818 AL121829.2-201ENST00000620908 328 ntBASIC20.26■□□□□ 0.83
RPP40O75818 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPP40O75818 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPP40O75818 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPP40O75818 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPP40O75818 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPP40O75818 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPP40O75818 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPP40O75818 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.25■□□□□ 0.83
RPP40O75818 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.25■□□□□ 0.83
RPP40O75818 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RPP40O75818 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPP40O75818 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPP40O75818 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
RPP40O75818 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
RPP40O75818 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPP40O75818 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPP40O75818 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPP40O75818 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RPP40O75818 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPP40O75818 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RPP40O75818 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.25■□□□□ 0.83
RPP40O75818 AC145285.6-201ENST00000604632 637 ntBASIC20.25■□□□□ 0.83
RPP40O75818 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.25■□□□□ 0.83
RPP40O75818 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.25■□□□□ 0.83
RPP40O75818 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPP40O75818 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPP40O75818 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RPP40O75818 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPP40O75818 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPP40O75818 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPP40O75818 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.24■□□□□ 0.83
RPP40O75818 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPP40O75818 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPP40O75818 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.24■□□□□ 0.83
RPP40O75818 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPP40O75818 DPP3P2-201ENST00000416030 1696 ntBASIC20.24■□□□□ 0.83
RPP40O75818 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPP40O75818 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.24■□□□□ 0.83
RPP40O75818 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPP40O75818 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.24■□□□□ 0.83
RPP40O75818 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.24■□□□□ 0.83
RPP40O75818 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPP40O75818 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms