Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCL13O43927 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.68■□□□□ 0.42
CXCL13O43927 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 AP006587.1-201ENST00000534129 1502 ntBASIC17.67■□□□□ 0.42
CXCL13O43927 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CXCL13O43927 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CXCL13O43927 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.67■□□□□ 0.42
CXCL13O43927 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.67■□□□□ 0.42
CXCL13O43927 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.67■□□□□ 0.42
CXCL13O43927 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CXCL13O43927 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CXCL13O43927 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CXCL13O43927 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL13O43927 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.67■□□□□ 0.42
CXCL13O43927 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL13O43927 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL13O43927 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CXCL13O43927 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.66■□□□□ 0.42
CXCL13O43927 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.66■□□□□ 0.42
CXCL13O43927 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CXCL13O43927 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.66■□□□□ 0.42
CXCL13O43927 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.66■□□□□ 0.42
CXCL13O43927 AC066615.1-201ENST00000640911 628 ntBASIC17.66■□□□□ 0.42
CXCL13O43927 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL13O43927 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL13O43927 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL13O43927 TCF3P1-201ENST00000423021 1937 ntBASIC17.66■□□□□ 0.42
CXCL13O43927 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL13O43927 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL13O43927 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL13O43927 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL13O43927 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.66■□□□□ 0.42
CXCL13O43927 AP001271.2-201ENST00000624018 1556 ntBASIC17.66■□□□□ 0.42
CXCL13O43927 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CXCL13O43927 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CXCL13O43927 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CXCL13O43927 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.65■□□□□ 0.42
CXCL13O43927 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.65■□□□□ 0.42
CXCL13O43927 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.65■□□□□ 0.42
CXCL13O43927 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CXCL13O43927 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.65■□□□□ 0.42
CXCL13O43927 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.65■□□□□ 0.42
CXCL13O43927 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.65■□□□□ 0.42
CXCL13O43927 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.65■□□□□ 0.42
CXCL13O43927 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.65■□□□□ 0.42
CXCL13O43927 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.65■□□□□ 0.42
CXCL13O43927 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.65■□□□□ 0.42
CXCL13O43927 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.65■□□□□ 0.42
CXCL13O43927 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.65■□□□□ 0.42
CXCL13O43927 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.65■□□□□ 0.42
CXCL13O43927 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.65■□□□□ 0.42
CXCL13O43927 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.65■□□□□ 0.42
CXCL13O43927 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL13O43927 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CXCL13O43927 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CXCL13O43927 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.64■□□□□ 0.41
CXCL13O43927 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.64■□□□□ 0.41
CXCL13O43927 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXCL13O43927 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CXCL13O43927 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.64■□□□□ 0.41
CXCL13O43927 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.64■□□□□ 0.41
CXCL13O43927 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.64■□□□□ 0.41
CXCL13O43927 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.64■□□□□ 0.41
CXCL13O43927 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CXCL13O43927 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CXCL13O43927 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.64■□□□□ 0.41
CXCL13O43927 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.64■□□□□ 0.41
CXCL13O43927 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.64■□□□□ 0.41
CXCL13O43927 AC004264.1-201ENST00000608354 794 ntBASIC17.64■□□□□ 0.41
CXCL13O43927 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms