Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF13O43567 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF13O43567 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF13O43567 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF13O43567 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF13O43567 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF13O43567 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RNF13O43567 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF13O43567 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF13O43567 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF13O43567 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
RNF13O43567 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF13O43567 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 BX276092.2-201ENST00000417668 665 ntBASIC17.92■□□□□ 0.46
RNF13O43567 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
RNF13O43567 CROCCP5-201ENST00000436658 830 ntBASIC17.92■□□□□ 0.46
RNF13O43567 RAP2CP1-201ENST00000605103 478 ntBASIC17.92■□□□□ 0.46
RNF13O43567 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF13O43567 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF13O43567 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RNF13O43567 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
RNF13O43567 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF13O43567 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNF13O43567 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNF13O43567 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF13O43567 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNF13O43567 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF13O43567 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF13O43567 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF13O43567 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF13O43567 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF13O43567 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF13O43567 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF13O43567 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF13O43567 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF13O43567 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF13O43567 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF13O43567 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF13O43567 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RNF13O43567 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
RNF13O43567 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
RNF13O43567 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF13O43567 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF13O43567 TMEM179-206ENST00000616017 1645 ntBASIC17.9■□□□□ 0.46
RNF13O43567 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF13O43567 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF13O43567 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF13O43567 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RNF13O43567 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF13O43567 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF13O43567 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF13O43567 AC005332.7-201ENST00000614046 2005 ntBASIC17.9■□□□□ 0.46
RNF13O43567 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF13O43567 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF13O43567 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.9■□□□□ 0.46
RNF13O43567 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF13O43567 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF13O43567 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF13O43567 AL121832.2-201ENST00000610979 668 ntBASIC17.9■□□□□ 0.46
RNF13O43567 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF13O43567 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF13O43567 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.9■□□□□ 0.46
RNF13O43567 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF13O43567 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF13O43567 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF13O43567 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RNF13O43567 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RNF13O43567 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.89■□□□□ 0.46
RNF13O43567 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.89■□□□□ 0.46
RNF13O43567 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF13O43567 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF13O43567 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF13O43567 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.89■□□□□ 0.45
RNF13O43567 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF13O43567 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF13O43567 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF13O43567 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
RNF13O43567 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF13O43567 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms