Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.72■□□□□ 0.59
PROM1O43490 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.71■□□□□ 0.59
PROM1O43490 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PROM1O43490 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PROM1O43490 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PROM1O43490 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PROM1O43490 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PROM1O43490 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PROM1O43490 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PROM1O43490 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.71■□□□□ 0.59
PROM1O43490 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PROM1O43490 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PROM1O43490 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.71■□□□□ 0.59
PROM1O43490 RPS2P52-201ENST00000469610 820 ntBASIC18.71■□□□□ 0.59
PROM1O43490 UNC93B4-201ENST00000505679 747 ntBASIC18.71■□□□□ 0.59
PROM1O43490 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.71■□□□□ 0.59
PROM1O43490 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PROM1O43490 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PROM1O43490 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PROM1O43490 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.71■□□□□ 0.59
PROM1O43490 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.71■□□□□ 0.59
PROM1O43490 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PROM1O43490 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.71■□□□□ 0.58
PROM1O43490 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.7■□□□□ 0.58
PROM1O43490 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PROM1O43490 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.7■□□□□ 0.58
PROM1O43490 RNA5SP413-201ENST00000516373 109 ntBASIC18.7■□□□□ 0.58
PROM1O43490 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.7■□□□□ 0.58
PROM1O43490 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.7■□□□□ 0.58
PROM1O43490 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.7■□□□□ 0.58
PROM1O43490 AC116351.2-201ENST00000606540 1585 ntBASIC18.7■□□□□ 0.58
PROM1O43490 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PROM1O43490 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.7■□□□□ 0.58
PROM1O43490 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.7■□□□□ 0.58
PROM1O43490 AC018553.1-201ENST00000616682 1458 ntBASIC18.7■□□□□ 0.58
PROM1O43490 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PROM1O43490 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PROM1O43490 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PROM1O43490 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PROM1O43490 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.7■□□□□ 0.58
PROM1O43490 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.7■□□□□ 0.58
PROM1O43490 AC124283.5-201ENST00000624661 1809 ntBASIC18.7■□□□□ 0.58
PROM1O43490 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PROM1O43490 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.69■□□□□ 0.58
PROM1O43490 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PROM1O43490 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PROM1O43490 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PROM1O43490 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PROM1O43490 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.69■□□□□ 0.58
PROM1O43490 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.69■□□□□ 0.58
PROM1O43490 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PROM1O43490 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PROM1O43490 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.69■□□□□ 0.58
PROM1O43490 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.69■□□□□ 0.58
PROM1O43490 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PROM1O43490 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.69■□□□□ 0.58
PROM1O43490 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.69■□□□□ 0.58
PROM1O43490 AC008687.6-201ENST00000596318 630 ntBASIC18.69■□□□□ 0.58
PROM1O43490 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.69■□□□□ 0.58
PROM1O43490 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PROM1O43490 AC125437.2-201ENST00000625180 2167 ntBASIC18.69■□□□□ 0.58
PROM1O43490 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PROM1O43490 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PROM1O43490 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.69■□□□□ 0.58
PROM1O43490 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PROM1O43490 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PROM1O43490 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.68■□□□□ 0.58
PROM1O43490 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.68■□□□□ 0.58
PROM1O43490 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PROM1O43490 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PROM1O43490 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PROM1O43490 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PROM1O43490 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PROM1O43490 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.68■□□□□ 0.58
PROM1O43490 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PROM1O43490 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.68■□□□□ 0.58
PROM1O43490 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PROM1O43490 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PROM1O43490 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.68■□□□□ 0.58
PROM1O43490 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.68■□□□□ 0.58
PROM1O43490 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.68■□□□□ 0.58
PROM1O43490 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PROM1O43490 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.68■□□□□ 0.58
PROM1O43490 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.68■□□□□ 0.58
PROM1O43490 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.68■□□□□ 0.58
PROM1O43490 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.68■□□□□ 0.58
PROM1O43490 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.68■□□□□ 0.58
PROM1O43490 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms