Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RTCAO00442 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.81■□□□□ 0.6
RTCAO00442 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.81■□□□□ 0.6
RTCAO00442 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.81■□□□□ 0.6
RTCAO00442 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.81■□□□□ 0.6
RTCAO00442 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.81■□□□□ 0.6
RTCAO00442 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RTCAO00442 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.81■□□□□ 0.6
RTCAO00442 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.81■□□□□ 0.6
RTCAO00442 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RTCAO00442 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RTCAO00442 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 AC116351.2-201ENST00000606540 1585 ntBASIC18.81■□□□□ 0.6
RTCAO00442 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.8■□□□□ 0.6
RTCAO00442 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTCAO00442 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
RTCAO00442 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTCAO00442 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTCAO00442 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.8■□□□□ 0.6
RTCAO00442 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTCAO00442 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTCAO00442 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.8■□□□□ 0.6
RTCAO00442 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RTCAO00442 UNC93B5-201ENST00000530315 699 ntBASIC18.8■□□□□ 0.6
RTCAO00442 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
RTCAO00442 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.8■□□□□ 0.6
RTCAO00442 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.8■□□□□ 0.6
RTCAO00442 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.8■□□□□ 0.6
RTCAO00442 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RTCAO00442 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.8■□□□□ 0.6
RTCAO00442 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RTCAO00442 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.8■□□□□ 0.6
RTCAO00442 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTCAO00442 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.8■□□□□ 0.6
RTCAO00442 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTCAO00442 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RTCAO00442 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.79■□□□□ 0.6
RTCAO00442 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.79■□□□□ 0.6
RTCAO00442 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.79■□□□□ 0.6
RTCAO00442 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RTCAO00442 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
RTCAO00442 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.79■□□□□ 0.6
RTCAO00442 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.79■□□□□ 0.6
RTCAO00442 UNC93B4-201ENST00000505679 747 ntBASIC18.79■□□□□ 0.6
RTCAO00442 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.79■□□□□ 0.6
RTCAO00442 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.79■□□□□ 0.6
RTCAO00442 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.79■□□□□ 0.6
RTCAO00442 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 AC008687.6-201ENST00000596318 630 ntBASIC18.79■□□□□ 0.6
RTCAO00442 AC120498.8-201ENST00000614275 531 ntBASIC18.79■□□□□ 0.6
RTCAO00442 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
RTCAO00442 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.79■□□□□ 0.6
RTCAO00442 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTCAO00442 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.78■□□□□ 0.6
RTCAO00442 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.78■□□□□ 0.6
RTCAO00442 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.78■□□□□ 0.6
RTCAO00442 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.78■□□□□ 0.6
RTCAO00442 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.78■□□□□ 0.6
RTCAO00442 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.78■□□□□ 0.6
RTCAO00442 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.78■□□□□ 0.6
RTCAO00442 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.78■□□□□ 0.6
RTCAO00442 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RTCAO00442 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.78■□□□□ 0.6
RTCAO00442 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTCAO00442 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms