Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 KRT8P20-201ENST00000423953 1409 ntBASIC18.23■□□□□ 0.51
TNFRSF11BO00300 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
TNFRSF11BO00300 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 TERF1P5-201ENST00000477545 1207 ntBASIC18.21■□□□□ 0.51
TNFRSF11BO00300 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
TNFRSF11BO00300 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TNFRSF11BO00300 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TNFRSF11BO00300 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.2■□□□□ 0.5
TNFRSF11BO00300 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms